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  5. Azfi_s0016.g014215

Azfi_s0016.g014215


Description : not classified & original description: CDS=1-8898


Gene families : OG0003819 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0016.g014215

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00194330 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G50380 No alias Protein of unknown function (DUF1162) 0.05 OrthoFinder output from all 47 species
Ala_g07664 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s1622.g104771 No alias not classified & original description: CDS=487-1023 0.03 OrthoFinder output from all 47 species
Gb_10941 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_15290 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g21420 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10437277g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10437277g0030 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc02g090130.4.1 Solyc02g090130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g17802 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR009543 VPS13_VAB 2067 2412
No external refs found!