Azfi_s0015.g013756

Description : small subunit of TFIIa basal transcription factor complex & original description: CDS=77-403

Gene families : OG0001736 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001736_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0015.g013756
Cluster	HCCA: Cluster_94

Target	Alias	Description	ECC score	Gene Family Method
Ceric.10G010700.1	Ceric.10G010700	small subunit of TFIIa basal transcription factor...	0.04	OrthoFinder output from all 47 species
Len_g04033	No alias	small subunit of TFIIa basal transcription factor...	0.03	OrthoFinder output from all 47 species
Lfl_g29896	No alias	small subunit of TFIIa basal transcription factor...	0.03	OrthoFinder output from all 47 species
Mp8g03150.1	No alias	small subunit of TFIIa basal transcription factor complex	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005667	transcription regulator complex	None	Extended
CC	GO:0005672	transcription factor TFIIA complex	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006352	DNA-templated transcription initiation	None	Extended
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0090575	RNA polymerase II transcription regulator complex	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
BP	GO:0006465	signal peptide processing	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
BP	GO:0016485	protein processing	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR015872	TFIIA_gsu_N	32	76
IPR015871	TFIIA_gsu_C	87	127

External Links

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Azfi_s0015.g013756

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation