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  5. Azfi_s0010.g012042

Azfi_s0010.g012042


Description : not classified & original description: CDS=1-7353


Gene families : OG0002247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0010.g012042

Target Alias Description ECC score Gene Family Method Actions
Aev_g04200 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022139001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_29158 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g27820.1 LOC_Os03g27820 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g22997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g31546 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41533 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g22845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo440052 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc02g090760.4.1 Solyc02g090760 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e001911_P001 Zm00001e001911 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!