Azfi_s0009.g011847

Description : splicing factor *(SR45a) & original description: CDS=115-1053

Gene families : OG0001089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001089_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0009.g011847
Cluster	HCCA: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
AT1G07350	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.04	OrthoFinder output from all 47 species
Als_g39794	No alias	splicing factor *(SR45a) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g05560	No alias	splicing factor *(SR45a) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g11813	No alias	splicing factor *(SR45a) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc06g076670.3.1	Solyc06g076670	Serine/arginine-rich splicing factor SR45a...	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0031072	heat shock protein binding	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	50	119

External Links

No external refs found!