Heatmap: Cluster_4 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Vegetative Sporophyte
Adult Sporophyte
Leaf (0 mg/L NH4NO3)
Leaf (30 mg/L NH4NO3)
Leaf (90 mg/L NH4NO3)
Sporophyte; w/o NH4NO3, w/o cyanobacteria
Sporophyte; w/o NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w/o cyanobacteria
Root Tip, D-3 6h mock treated
Root Tip, D-3 6h 0.1 uM IAA treated
Root Tip, D-3 6h 0.5 uM trans-zeatin treated
Microsporocarp
-0.05 -4.77 -0.28 0.31 0.92 0.5 -0.08 -0.21 -0.51 -0.45 -0.59 -0.5 1.02
0.14 -3.51 -0.2 0.47 0.81 0.15 -0.51 -0.63 -0.54 0.67 0.38 0.32 -0.93
-0.43 -0.91 -1.15 -0.42 0.93 0.98 -0.43 -1.5 -1.39 0.67 0.42 0.31 -0.01
0.47 -0.76 -0.96 -1.14 -0.77 0.43 -0.4 -1.04 -0.32 0.35 0.43 0.15 1.23
-0.81 -1.23 -1.29 0.31 0.74 0.83 -0.15 -0.75 -0.61 0.63 0.58 0.38 -1.3
0.09 -4.2 -1.43 -2.06 -1.27 0.64 0.1 -0.15 -0.12 0.66 0.67 0.55 0.82
-0.96 -2.48 -0.42 0.73 1.61 0.27 -1.03 -1.91 -1.94 0.47 -0.08 -0.05 0.42
-0.15 -0.81 0.05 -0.59 0.23 1.02 -0.31 -1.32 -0.21 0.3 0.17 0.01 0.23
-0.54 -1.19 -0.58 -0.19 0.14 0.22 -0.38 -0.58 -0.44 0.58 0.61 0.5 0.54
-0.34 0.54 -1.28 0.85 1.74 -0.11 -0.55 -0.33 -0.69 -2.17 -2.85 -2.05 0.66
-0.25 -2.44 -0.62 -0.16 0.14 0.0 -0.12 -0.29 -0.01 0.57 0.44 0.75 0.11
-0.46 -0.81 0.96 0.53 0.53 0.39 -0.2 -0.69 -0.4 -0.36 -0.37 -0.49 0.06
0.17 -1.26 0.04 -0.65 0.64 0.71 -0.59 -1.64 -1.25 0.28 0.18 0.2 0.76
-0.19 -1.94 -1.1 -0.2 0.68 0.84 -0.55 -1.51 -1.61 0.63 0.51 0.43 0.55
-1.21 -5.24 -0.52 0.82 1.37 0.5 -1.15 -2.02 -1.98 -0.03 -0.03 -0.3 1.24
-0.08 -2.01 -0.0 0.19 0.07 0.22 -0.11 -0.26 -0.2 -0.17 -0.06 0.12 0.91
-1.04 -2.93 -1.86 -1.12 0.32 0.73 -0.99 -2.3 -1.96 1.05 1.07 0.92 0.77
-0.06 -1.61 0.11 0.13 0.81 0.63 -0.26 -0.51 -0.59 0.01 -0.16 -0.26 0.38
0.94 -2.29 - - - 0.31 -0.46 -0.8 0.77 0.71 0.63 0.49 1.02
-0.35 -0.8 -0.48 0.51 0.47 0.1 -0.57 -0.7 -0.93 0.74 0.5 0.42 -0.29
-0.25 -3.33 -0.38 -0.57 -0.54 0.81 -0.37 -0.88 -0.13 0.58 0.89 0.82 -0.25
-0.31 -2.02 0.58 0.25 0.36 0.8 -0.1 -0.41 -0.12 -0.17 -0.27 -0.4 0.21
-0.42 -2.1 -0.38 0.81 0.95 0.15 -0.54 -0.44 -0.49 0.14 0.08 0.04 0.17
-0.84 -3.44 -1.19 -0.02 0.85 1.19 -0.47 -2.12 -2.18 0.0 -0.41 -0.44 1.67
0.06 -2.48 -0.67 0.29 0.67 1.24 0.45 0.07 -0.02 -0.52 -0.9 -0.89 -0.34
-1.06 -7.32 0.8 0.66 0.65 1.15 -0.8 -2.61 -1.84 -0.43 0.04 -0.34 0.87
-1.02 -3.16 -2.29 -2.23 -1.3 1.27 -0.45 -3.3 -2.58 1.1 1.08 1.24 0.62
-0.1 -3.4 -1.33 -0.74 -0.09 0.82 -0.16 -0.57 -0.5 0.76 0.57 0.6 0.38
-0.46 -2.46 -2.06 -0.75 0.83 1.05 -0.67 -1.65 -2.31 0.51 0.25 -0.01 1.41
-0.65 -3.62 -0.13 0.85 1.73 0.2 -0.42 -0.54 -0.57 -0.58 -0.91 -1.15 0.41
-0.16 -1.32 -0.32 -0.31 -0.03 0.32 -0.41 -0.64 -0.13 0.38 0.64 0.57 0.29
-0.09 -1.06 -0.45 0.41 0.91 -0.09 -0.83 -1.16 -1.0 0.68 0.49 0.45 -0.29
-0.3 -2.17 0.08 0.06 -0.1 0.36 0.2 -1.0 0.28 0.22 0.62 0.19 -0.09
-0.06 -2.5 -0.75 -0.04 0.27 -0.14 -1.09 -1.27 -0.87 0.95 0.7 0.59 0.76
-1.5 -6.83 -1.07 0.52 2.36 -1.29 -2.8 -3.57 -5.89 -0.1 -0.37 -0.53 1.34
0.07 -3.43 0.12 0.92 1.48 1.07 -0.23 -1.13 -0.84 -1.04 -1.5 -1.67 -0.03
-0.2 -0.59 -0.13 -0.39 -0.06 -0.15 -0.89 -1.39 -0.82 0.64 0.66 1.08 0.24
0.12 -1.62 -0.35 0.07 0.84 -0.22 -1.09 -1.4 -1.27 0.87 0.6 0.59 -0.02
-0.39 -1.93 -0.18 0.09 0.18 0.15 -0.19 -0.27 -0.16 0.46 0.53 0.27 0.21
0.16 -2.53 -2.08 -0.76 0.58 1.18 -0.29 -0.71 -1.03 -1.5 -1.83 -2.25 2.12
0.51 0.68 -0.32 -1.29 -1.24 -0.61 -0.86 -1.19 0.27 0.01 0.04 -0.3 1.4
-0.3 - -0.49 1.51 1.75 0.32 0.25 -0.87 - -2.24 -2.77 -0.34 0.18

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.