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  5. Azfi_s0001.g000641

Azfi_s0001.g000641


Description : not classified & original description: CDS=1-1959


Gene families : OG0000027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0001.g000641

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g48650.2 LOC_Os06g48650 protease (SBT2) 0.02 OrthoFinder output from all 47 species
MA_10435307g0010 No alias Subtilisin-like protease SBT3.6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_58710g0010 No alias Subtilisin-like protease SBT3.6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008236 serine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR000209 Peptidase_S8/S53_dom 36 466
IPR041469 Subtilisin-like_FN3 551 645
No external refs found!