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  5. Ceric.39G029800.1

Ceric.39G029800.1 (Ceric.39G029800)


Aliases : Ceric.39G029800

Description : EC_4.1 carbon-carbon lyase & original description: pacid=50582488 polypeptide=Ceric.39G029800.1.p locus=Ceric.39G029800 ID=Ceric.39G029800.1.v2.1 annot-version=v2.1


Gene families : OG0001402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.39G029800.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Adi_g014514 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010014 No alias EC_4.1 carbon-carbon lyase & original description: CDS=275-1837 0.11 OrthoFinder output from all 47 species
LOC_Os05g39310.1 LOC_Os05g39310 pyruvate decarboxylase 0.02 OrthoFinder output from all 47 species
LOC_Os05g39320.1 LOC_Os05g39320 pyruvate decarboxylase 0.03 OrthoFinder output from all 47 species
LOC_Os07g49250.1 LOC_Os07g49250 pyruvate decarboxylase 0.02 OrthoFinder output from all 47 species
Msp_g13118 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16757 PDC2 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc10g076510.2.1 Solyc10g076510 pyruvate decarboxylase 0.02 OrthoFinder output from all 47 species
Zm00001e027278_P002 Zm00001e027278 pyruvate decarboxylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0030976 thiamine pyrophosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012000 Thiamin_PyroP_enz_cen_dom 242 358
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 48 214
No external refs found!