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  5. Ceric.38G008000.1

Ceric.38G008000.1 (PSBB, Ceric.38G008000)


Aliases : PSBB, Ceric.38G008000

Description : component *(PsbB/CP47) of PS-II reaction center complex & original description: pacid=50580062 polypeptide=Ceric.38G008000.1.p locus=Ceric.38G008000 ID=Ceric.38G008000.1.v2.1 annot-version=v2.1


Gene families : OG0004191 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004191_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.38G008000.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00585p00000100 PSBB,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.08 OrthoFinder output from all 47 species
ATCG00680 PSBB photosystem II reaction center protein B 0.33 OrthoFinder output from all 47 species
Aev_g08305 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.35 OrthoFinder output from all 47 species
Als_g00826 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.11 OrthoFinder output from all 47 species
Aob_g02288 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.17 OrthoFinder output from all 47 species
Cba_g02603 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.1 OrthoFinder output from all 47 species
Ceric.02G013400.1 PSBB, Ceric.02G013400 component *(PsbB/CP47) of PS-II reaction center complex... 0.1 OrthoFinder output from all 47 species
Ceric.14G009600.1 PSBB, Ceric.14G009600 not classified & original description: pacid=50634641... 0.08 OrthoFinder output from all 47 species
Ceric.16G060800.1 PSBB, Ceric.16G060800 not classified & original description: pacid=50590274... 0.04 OrthoFinder output from all 47 species
Ceric.19G038500.1 PSBB, Ceric.19G038500 not classified & original description: pacid=50576616... 0.09 OrthoFinder output from all 47 species
Ceric.30G038800.1 PSBB, Ceric.30G038800 not classified & original description: pacid=50609266... 0.12 OrthoFinder output from all 47 species
Dac_g09466 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.04 OrthoFinder output from all 47 species
Dcu_g21021 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.15 OrthoFinder output from all 47 species
Dde_g03407 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01006503001 PSBB Photosystem II CP47 reaction center protein OS=Phaseolus vulgaris 0.08 OrthoFinder output from all 47 species
Gb_23567 PSBB component PsbB/CP47 of PS-II reaction center complex 0.17 OrthoFinder output from all 47 species
Gb_27294 PSBB Photosystem II CP47 reaction center protein OS=Cycas... 0.18 OrthoFinder output from all 47 species
LOC_Os06g39708.1 PSBB, LOC_Os06g39708 component PsbB/CP47 of PS-II reaction center complex 0.34 OrthoFinder output from all 47 species
LOC_Os09g04680.1 PSBB, LOC_Os09g04680 Photosystem II CP47 reaction center protein OS=Oryza... 0.33 OrthoFinder output from all 47 species
LOC_Os10g21310.1 PSBB, LOC_Os10g21310 component PsbB/CP47 of PS-II reaction center complex 0.3 OrthoFinder output from all 47 species
LOC_Os12g10600.1 PSBB, LOC_Os12g10600 Photosystem II CP47 reaction center protein OS=Oryza... 0.04 OrthoFinder output from all 47 species
Lfl_g04892 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.22 OrthoFinder output from all 47 species
Mpzg01020.1 PSBB component PsbB/CP47 of PS-II reaction center complex 0.1 OrthoFinder output from all 47 species
Ore_g02100 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.17 OrthoFinder output from all 47 species
Pir_g05119 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.13 OrthoFinder output from all 47 species
Pnu_g00696 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.05 OrthoFinder output from all 47 species
Pp3c21_5650V3.1 PETB, Pp3c21_5650 photosynthetic electron transfer B 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002254 PSBB not classified & original description: CDS=1-408 0.11 OrthoFinder output from all 47 species
Sam_g10281 No alias component *(PsbB/CP47) of PS-II reaction center complex... 0.1 OrthoFinder output from all 47 species
Smo137729 PSBB Photosystem II CP47 reaction center protein OS=Angiopteris evecta 0.19 OrthoFinder output from all 47 species
Solyc00g500024.1.1 PSBB, Solyc00g500024 component PsbB/CP47 of PS-II reaction center complex 0.29 OrthoFinder output from all 47 species
Solyc00g500071.1.1 PSBB, Solyc00g500071 component PsbB/CP47 of PS-II reaction center complex 0.29 OrthoFinder output from all 47 species
Spa_g04296 PSBB component *(PsbB/CP47) of PS-II reaction center complex... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEA Interproscan
BP GO:0009767 photosynthetic electron transport chain IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016168 chlorophyll binding IEA Interproscan
BP GO:0019684 photosynthesis, light reaction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000932 PS_antenna-like 1 500
No external refs found!