Ceric.37G036700.1 (AtRABG3d, RABG3d,...)

Aliases : AtRABG3d, RABG3d, Ceric.37G036700

Description : G-class RAB GTPase & original description: pacid=50616917 polypeptide=Ceric.37G036700.1.p locus=Ceric.37G036700 ID=Ceric.37G036700.1.v2.1 annot-version=v2.1

Gene families : OG0000865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000865_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.37G036700.1

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os01g51700.1	ATRABG3B,...	G-class RAB GTPase	0.02	OrthoFinder output from all 47 species
Len_g11961	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
MA_10043564g0010	AtRABG3d, RABG3d	G-class RAB GTPase	0.02	OrthoFinder output from all 47 species
Nbi_g06063	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Pp3c1_12070V3.1	AtRABG3d,...	RAB GTPase homolog G3D	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000347	THO complex	IEP	HCCA
CC	GO:0000445	THO complex part of transcription export complex	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0016226	iron-sulfur cluster assembly	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016872	intramolecular lyase activity	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	10	177

External Links

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Ceric.37G036700.1 (AtRABG3d, RABG3d,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation