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  5. Ceric.35G006300.1

Ceric.35G006300.1 (Ceric.35G006300)


Aliases : Ceric.35G006300

Description : Trihelix-type transcription factor & original description: pacid=50581262 polypeptide=Ceric.35G006300.1.p locus=Ceric.35G006300 ID=Ceric.35G006300.1.v2.1 annot-version=v2.1


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.35G006300.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00147950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
AT1G33240 AT-GTL1, GTL1, AT-GTL2 GT-2-like 1 0.05 OrthoFinder output from all 47 species
Aev_g06698 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08051 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g50192 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g02188 AT-GTL1, GTL1, AT-GTL2 Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05344 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09047 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41036 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22028 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0305.g063935 AT-GT2, GT2 not classified & original description: CDS=293-1360 0.06 OrthoFinder output from all 47 species
Cba_g27686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04858 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21159 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08505 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08646 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27401 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01026588001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.06 OrthoFinder output from all 47 species
Gb_30639 No alias transcription factor (Trihelix) 0.05 OrthoFinder output from all 47 species
LOC_Os04g45750.1 LOC_Os04g45750 transcription factor (Trihelix) 0.05 OrthoFinder output from all 47 species
LOC_Os10g37240.4 LOC_Os10g37240 Trihelix transcription factor GT-2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10427500g0020 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
MA_10433499g0020 AT-GT2, GT2 transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
MA_47951g0010 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Mp8g08100.1 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Msp_g10228 AT-GT2, GT2 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47167 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60651 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60919 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022074 AT-GT2, GT2 Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g22480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48438 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo85122 No alias Trihelix transcription factor GT-2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc11g005380.2.1 Solyc11g005380 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Tin_g19131 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 617 704
IPR044822 Myb_DNA-bind_4 216 302
No external refs found!