1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.33G007900.1

Ceric.33G007900.1 (Ceric.33G007900)


Aliases : Ceric.33G007900

Description : not classified & original description: pacid=50607060 polypeptide=Ceric.33G007900.1.p locus=Ceric.33G007900 ID=Ceric.33G007900.1.v2.1 annot-version=v2.1


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.33G007900.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g39387 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07489 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65113.t1 Aspi01Gene65113 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15359 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12357 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g11326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g45980.1 LOC_Os02g45980 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58960.1 PRAF1, LOC_Os04g58960 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Len_g02424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15592 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03847 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g28188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo430894 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Solyc03g116360.2.1 Solyc03g116360 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Spa_g55815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26046 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007139_P001 Zm00001e007139 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Zm00001e015467_P001 Zm00001e015467 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Zm00001e023246_P001 Zm00001e023246 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 375 424
IPR000408 Reg_chr_condens 599 645
IPR000408 Reg_chr_condens 492 540
IPR000408 Reg_chr_condens 428 477
IPR000408 Reg_chr_condens 324 372
IPR000306 Znf_FYVE 649 715
No external refs found!