- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : SUF4, Ceric.31G034100
Description : FLC-binding component *(SUF4) of FRI-C transcription effector complex & original description: pacid=50574936 polypeptide=Ceric.31G034100.1.p locus=Ceric.31G034100 ID=Ceric.31G034100.1.v2.1 annot-version=v2.1
Gene families : OG0002334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002334_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00011p00256770 | SUF4,... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g059003 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g104399 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g104400 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g19237 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g22046 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0157.g053789 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g25906 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g305200 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g22754 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g23742 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g26782 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g19813 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01012145001 | SUF4 | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38566 | SUF4 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Gb_39703 | SUF4 | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| MA_10435270g0010 | SUF4 | C2H2 zinc finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| Mp4g13860.1 | SUF4 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g26521 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g03322 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g31144 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g12837 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g35817 | No alias | FLC-binding component *(SUF4) of FRI-C transcription... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g032120.3.1 | SUF4, Solyc02g032120 | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g081620.3.1 | SUF4, Solyc02g081620 | C2H2 zinc finger transcription factor | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g16449 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g23103 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e010342_P005 | SUF4, Zm00001e010342 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |