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Aliases : Ceric.29G060800
Description : not classified & original description: pacid=50624742 polypeptide=Ceric.29G060800.1.p locus=Ceric.29G060800 ID=Ceric.29G060800.1.v2.1 annot-version=v2.1
Gene families : OG0000608 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000608_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G21160 | No alias | LA RNA-binding protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g019211 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g02674 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g04484 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g26663 | No alias | not classified & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Aob_g14550 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g16006 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g06975 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene62010.t2 | Aspi01Gene62010 | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g009780 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000498.93 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05816 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.1 | OrthoFinder output from all 47 species | |
| Dcu_g19294 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Dcu_g19632 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g10054 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g07929 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g07940 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01029892001 | No alias | RNA processing.RNA decay.deadenylation-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_04152 | No alias | La-related protein 1C OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g16110.1 | LOC_Os01g16110 | XRN4-exoribonuclease cofactor (LARP1) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g02117 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g07864 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| MA_1763g0010 | No alias | La-related protein 1A OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g19204 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g27548 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Solyc02g061980.3.1 | Solyc02g061980 | La-related protein 1C OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g46280 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e025537_P001 | Zm00001e025537 | XRN4-exoribonuclease cofactor (LARP1) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
| MF | GO:0031267 | small GTPase binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| MF | GO:0051020 | GTPase binding | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006630 | La_HTH | 321 | 376 |
| No external refs found! |