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  5. Ehy_g01626

Ehy_g01626 (VPS53, HIT1, ATVPS53)


Aliases : VPS53, HIT1, ATVPS53

Description : component *(VPS53/HIT1) of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes & original description: none


Gene families : OG0003936 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003936_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g01626

Target Alias Description ECC score Gene Family Method Actions
AT1G50500 VPS53, HIT1, ATVPS53 Membrane trafficking VPS53 family protein 0.06 OrthoFinder output from all 47 species
Aev_g06143 VPS53, HIT1, ATVPS53 component *(VPS53/HIT1) of GARP/EARP... 0.04 OrthoFinder output from all 47 species
Ala_g31947 VPS53, HIT1, ATVPS53 component *(VPS53/HIT1) of GARP/EARP... 0.02 OrthoFinder output from all 47 species
Ceric.34G024900.1 VPS53, HIT1,... component *(VPS53/HIT1) of GARP/EARP... 0.03 OrthoFinder output from all 47 species
Dcu_g22740 VPS53, HIT1, ATVPS53 component *(VPS53/HIT1) of GARP/EARP... 0.05 OrthoFinder output from all 47 species
GSVIVT01016094001 VPS53, HIT1, ATVPS53 Vesicle trafficking.target membrane tethering.GARP/EARP... 0.03 OrthoFinder output from all 47 species
Gb_31032 VPS53, HIT1, ATVPS53 component VPS53/HIT1 of GARP/EARP... 0.02 OrthoFinder output from all 47 species
LOC_Os01g67880.1 VPS53, HIT1,... component VPS53/HIT1 of GARP/EARP... 0.02 OrthoFinder output from all 47 species
Lfl_g04212 VPS53, HIT1, ATVPS53 component *(VPS53/HIT1) of GARP/EARP... 0.07 OrthoFinder output from all 47 species
Mp8g18200.1 VPS53, HIT1, ATVPS53 component VPS53/HIT1 of GARP/EARP... 0.03 OrthoFinder output from all 47 species
Msp_g15916 VPS53, HIT1, ATVPS53 component *(VPS53/HIT1) of GARP/EARP... 0.03 OrthoFinder output from all 47 species
Solyc04g049490.3.1 VPS53, HIT1,... component VPS53/HIT1 of GARP/EARP... 0.03 OrthoFinder output from all 47 species
Zm00001e018920_P001 VPS53, HIT1,... component VPS53/HIT1 of GARP/EARP... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR007234 Vps53_N 6 430
No external refs found!