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  5. Ceric.29G053500.1

Ceric.29G053500.1 (PRT6, Ceric.29G053500)


Aliases : PRT6, Ceric.29G053500

Description : type-I-residues E3 ubiquitin ligase *(PRT6) & original description: pacid=50625282 polypeptide=Ceric.29G053500.1.p locus=Ceric.29G053500 ID=Ceric.29G053500.1.v2.1 annot-version=v2.1


Gene families : OG0003565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003565_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.29G053500.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00210330 PRT6,... Protein degradation.N-end rule pathway of targeted... 0.02 OrthoFinder output from all 47 species
AT5G02310 PRT6 proteolysis 6 0.08 OrthoFinder output from all 47 species
Aev_g08637 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
Aev_g10474 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
Aev_g30042 PRT6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05145 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.04 OrthoFinder output from all 47 species
Aob_g27314 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001107.13 PRT6 Protein degradation.N-end rule pathway of targeted... 0.01 OrthoFinder output from all 47 species
Cre02.g089237 PRT6 Protein degradation.N-end rule pathway of targeted... 0.03 OrthoFinder output from all 47 species
Dcu_g37411 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
Dde_g11006 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01034167001 PRT6 E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01034169001 PRT6 Protein degradation.N-end rule pathway of targeted... 0.07 OrthoFinder output from all 47 species
Gb_11947 PRT6 type-I-residues E3 ubiquitin ligase (PRT6) 0.07 OrthoFinder output from all 47 species
LOC_Os01g05500.2 PRT6, LOC_Os01g05500 type-I-residues E3 ubiquitin ligase (PRT6) 0.06 OrthoFinder output from all 47 species
Len_g57965 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g04298 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.04 OrthoFinder output from all 47 species
MA_10429118g0010 PRT6 type-I-residues E3 ubiquitin ligase (PRT6) 0.08 OrthoFinder output from all 47 species
MA_387g0010 PRT6 type-I-residues E3 ubiquitin ligase (PRT6) 0.08 OrthoFinder output from all 47 species
MA_767141g0010 PRT6 E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp7g16320.1 PRT6 type-I-residues E3 ubiquitin ligase (PRT6) 0.04 OrthoFinder output from all 47 species
Msp_g15711 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.04 OrthoFinder output from all 47 species
Ore_g13164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16132 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021264 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
Sam_g18069 No alias type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
Smo438209 PRT6 Protein degradation.N-end rule pathway of targeted... 0.03 OrthoFinder output from all 47 species
Spa_g18736 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e016914_P004 PRT6, Zm00001e016914 type-I-residues E3 ubiquitin ligase (PRT6) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR003126 Znf_UBR 130 196
IPR044046 E3_ligase_UBR-like_C 1638 2131
No external refs found!