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  5. Ceric.29G017200.1

Ceric.29G017200.1 (Ceric.29G017200)


Aliases : Ceric.29G017200

Description : not classified & original description: pacid=50625875 polypeptide=Ceric.29G017200.1.p locus=Ceric.29G017200 ID=Ceric.29G017200.1.v2.1 annot-version=v2.1


Gene families : OG0001399 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001399_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.29G017200.1
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AT1G13940 No alias Plant protein of unknown function (DUF863) 0.05 OrthoFinder output from all 47 species
AT5G61300 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Als_g49517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61925.t2 Aspi01Gene61925 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000659 No alias not classified & original description: CDS=708-4082 0.04 OrthoFinder output from all 47 species
Azfi_s0020.g015477 No alias not classified & original description: CDS=1-2901 0.03 OrthoFinder output from all 47 species
Dac_g12935 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g10376 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g02880 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g08361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007141 No alias not classified & original description: CDS=1534-4596 0.06 OrthoFinder output from all 47 species
Solyc04g005500.3.1 Solyc04g005500 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc05g012640.3.1 Solyc05g012640 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g25833 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e003013_P001 Zm00001e003013 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR008581 DUF863_pln 975 1067
No external refs found!