Ceric.27G027600.1 (Ceric.27G027600)


Aliases : Ceric.27G027600

Description : not classified & original description: pacid=50605291 polypeptide=Ceric.27G027600.1.p locus=Ceric.27G027600 ID=Ceric.27G027600.1.v2.1 annot-version=v2.1


Gene families : OG0001497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001497_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.27G027600.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270600 evm_27.TU.AmTr_v1... 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
AMTR_s00017p00234440 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g055583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g103931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21138 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g28379 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g32208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g41657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58033.t1 Aspi01Gene58033 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0162.g054145 No alias not classified & original description: CDS=1-1809 0.03 OrthoFinder output from all 47 species
Cba_g10413 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g36170 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre04.g213905 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g08281 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g20118 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g47761 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g24624 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01022281001 No alias 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris 0.04 OrthoFinder output from all 47 species
Gb_11513 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_39308 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g05830.1 LOC_Os03g05830 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g30370.1 LOC_Os10g30370 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Len_g18833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58331 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g34973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11719 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g41477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25040 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13992 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g39366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g005170.2.1 Solyc11g005170 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g10142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19702 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e012773_P005 Zm00001e012773 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e038994_P002 Zm00001e038994 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0004484 mRNA guanylyltransferase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006370 7-methylguanosine mRNA capping IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008192 RNA guanylyltransferase activity IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0070568 guanylyltransferase activity IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 218 276
IPR000504 RRM_dom 312 383
IPR029123 RBM39_linker 403 512
No external refs found!