Ceric.23G039300.1 (Ceric.23G039300)

Aliases : Ceric.23G039300

Description : component *(cS23) of small plastid ribosomal-subunit proteome & original description: pacid=50610211 polypeptide=Ceric.23G039300.1.p locus=Ceric.23G039300 ID=Ceric.23G039300.1.v2.1 annot-version=v2.1

Gene families : OG0003343 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003343_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.23G039300.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00055110	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
Ala_g09246	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Als_g02788	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Als_g28969	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Aob_g18441	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Aop_g18177	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Aspi01Gene46394.t1	Aspi01Gene46394	component *(cS23) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Azfi_s0052.g031601	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Cba_g04351	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Cba_g17074	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Cba_g32123	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g68856	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Dac_g02540	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Dac_g08262	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Dde_g08494	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Lfl_g07037	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
MA_10432955g0010	No alias	component psPSRP3 of small ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
MA_19834g0010	No alias	component psPSRP3 of small ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Nbi_g11760	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Pir_g18227	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Solyc05g009570.3.1	Solyc05g009570	component psPSRP3 of small ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Spa_g06637	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006166	purine ribonucleoside salvage	IEP	HCCA
BP	GO:0006190	inosine salvage	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
MF	GO:0008252	nucleotidase activity	IEP	HCCA
MF	GO:0008253	5'-nucleotidase activity	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0009116	nucleoside metabolic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009119	ribonucleoside metabolic process	IEP	HCCA
BP	GO:0009163	nucleoside biosynthetic process	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0034404	nucleobase-containing small molecule biosynthetic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0042278	purine nucleoside metabolic process	IEP	HCCA
BP	GO:0042451	purine nucleoside biosynthetic process	IEP	HCCA
BP	GO:0042455	ribonucleoside biosynthetic process	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
BP	GO:0043094	cellular metabolic compound salvage	IEP	HCCA
BP	GO:0043101	purine-containing compound salvage	IEP	HCCA
BP	GO:0043174	nucleoside salvage	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046102	inosine metabolic process	IEP	HCCA
BP	GO:0046103	inosine biosynthetic process	IEP	HCCA
BP	GO:0046128	purine ribonucleoside metabolic process	IEP	HCCA
BP	GO:0046129	purine ribonucleoside biosynthetic process	IEP	HCCA
MF	GO:0050483	IMP 5'-nucleotidase activity	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1901657	glycosyl compound metabolic process	IEP	HCCA
BP	GO:1901659	glycosyl compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006924	Ribosomal_PSRP3/Ycf65	761	807

External Links

No external refs found!

Ceric.23G039300.1 (Ceric.23G039300)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation