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Aliases : Ceric.23G012800
Description : non-proteolytic core component *(ClpR) of chloroplast Clp-type protease complex & original description: pacid=50611327 polypeptide=Ceric.23G012800.1.p locus=Ceric.23G012800 ID=Ceric.23G012800.1.v2.1 annot-version=v2.1
Gene families : OG0000988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000988_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00194810 | CLPR4,... | Protein degradation.peptidase families.serine-type... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00164p00068000 | CLPR1, SVR2,... | Protein degradation.peptidase families.serine-type... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G49970 | CLPR1, SVR2, NCLPP5 | CLP protease proteolytic subunit 1 | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g07767 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g09550 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g00665 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g02995 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g00461 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g08836 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Cre03.g204350 | CLPR4 | Protein degradation.peptidase families.serine-type... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g06754 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17058 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g02711 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g21817 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g01031 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18668 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01003696001 | CLPR4 | Protein degradation.peptidase families.serine-type... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01031146001 | No alias | Protein degradation.peptidase families.serine-type... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_40312 | CLPR4 | non-proteolytic core component ClpR of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g22430.1 | LOC_Os03g22430 | non-proteolytic core component ClpR of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g51450.1 | CLPR1, SVR2,... | non-proteolytic core component ClpR of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Mp7g03170.1 | CLPR4 | non-proteolytic core component ClpR of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g07323 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g00915 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11203 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g004018 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16208 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g17177 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g52083 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Smo153292 | No alias | Protein degradation.peptidase families.serine-type... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g077890.3.1 | CLPR4, Solyc08g077890 | non-proteolytic core component ClpR of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g12805 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e017288_P001 | CLPR4, Zm00001e017288 | non-proteolytic core component ClpR of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e032571_P001 | CLPR1, SVR2,... | non-proteolytic core component ClpR of chloroplast... | 0.1 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
| BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023562 | ClpP/TepA | 134 | 313 |
| No external refs found! |