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  5. Ceric.20G037000.1

Ceric.20G037000.1 (Ceric.20G037000)


Aliases : Ceric.20G037000

Description : light chain of clathrin triskelion & original description: pacid=50567510 polypeptide=Ceric.20G037000.1.p locus=Ceric.20G037000 ID=Ceric.20G037000.1.v2.1 annot-version=v2.1


Gene families : OG0002188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002188_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.20G037000.1
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Adi_g059492 No alias light chain of clathrin triskelion & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44342 No alias light chain of clathrin triskelion & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07971 No alias light chain of clathrin triskelion & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033974001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007566 No alias light chain of clathrin triskelion & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEA Interproscan
CC GO:0030132 clathrin coat of coated pit IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003972 RNA ligase (ATP) activity IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008452 RNA ligase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR000996 Clathrin_L-chain 149 252
No external refs found!