Aliases : Ceric.1Z115300
Description : not classified & original description: pacid=50604734 polypeptide=Ceric.1Z115300.1.p locus=Ceric.1Z115300 ID=Ceric.1Z115300.1.v2.1 annot-version=v2.1
Gene families : OG0003699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003699_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ceric.1Z115300.1 | |
Cluster | HCCA: Cluster_149 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00006p00253660 | evm_27.TU.AmTr_v1... | Cell cycle.organelle machineries.DNA replication.type-Ia... | 0.05 | OrthoFinder output from all 47 species | |
AT4G31210 | No alias | DNA topoisomerase, type IA, core | 0.09 | OrthoFinder output from all 47 species | |
Adi_g021892 | No alias | type-Ia DNA topoisomerase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g07546 | No alias | type-Ia DNA topoisomerase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0066.g036119 | No alias | type-Ia DNA topoisomerase & original description: CDS=286-3858 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g27398 | No alias | type-Ia DNA topoisomerase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g46291 | No alias | type-Ia DNA topoisomerase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01035576001 | No alias | Cell cycle.organelle machineries.DNA replication.type-Ia... | 0.09 | OrthoFinder output from all 47 species | |
LOC_Os06g16980.1 | LOC_Os06g16980 | type-Ia DNA topoisomerase | 0.05 | OrthoFinder output from all 47 species | |
Len_g08848 | No alias | type-Ia DNA topoisomerase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Mp2g25830.1 | No alias | type-Ia DNA topoisomerase | 0.04 | OrthoFinder output from all 47 species | |
Msp_g13526 | No alias | type-Ia DNA topoisomerase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g24909 | No alias | type-Ia DNA topoisomerase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g42340 | No alias | type-Ia DNA topoisomerase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g17408 | No alias | type-Ia DNA topoisomerase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ore_g37104 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0226.g026330 | No alias | type-Ia DNA topoisomerase & original description: CDS=286-4206 | 0.06 | OrthoFinder output from all 47 species | |
Solyc02g081910.2.1 | Solyc02g081910 | type-Ia DNA topoisomerase | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e036824_P001 | Zm00001e036824 | type-Ia DNA topoisomerase | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003916 | DNA topoisomerase activity | IEA | Interproscan |
CC | GO:0005694 | chromosome | IEA | Interproscan |
BP | GO:0006265 | DNA topological change | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | HCCA |
MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0004527 | exonuclease activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006188 | IMP biosynthetic process | IEP | HCCA |
BP | GO:0006189 | 'de novo' IMP biosynthetic process | IEP | HCCA |
BP | GO:0006260 | DNA replication | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | HCCA |
BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | HCCA |
BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | HCCA |
BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | HCCA |
BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | HCCA |
BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | HCCA |
BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | HCCA |
BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | HCCA |
BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
MF | GO:0016881 | acid-amino acid ligase activity | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0046040 | IMP metabolic process | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
No external refs found! |