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  5. Ceric.14G027500.1

Ceric.14G027500.1 (ABO1, ELO2, Ceric.14G027500)


Aliases : ABO1, ELO2, Ceric.14G027500

Description : component *(ELP1) of ELONGATOR transcription elongation complex & original description: pacid=50634303 polypeptide=Ceric.14G027500.1.p locus=Ceric.14G027500 ID=Ceric.14G027500.1.v2.1 annot-version=v2.1


Gene families : OG0006371 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006371_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.14G027500.1

Target Alias Description ECC score Gene Family Method Actions
AT5G13680 ABO1, ELO2 IKI3 family protein 0.08 OrthoFinder output from all 47 species
Adi_g017444 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.03 OrthoFinder output from all 47 species
Aev_g35033 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.03 OrthoFinder output from all 47 species
Aob_g11767 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.03 OrthoFinder output from all 47 species
Dcu_g09746 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.03 OrthoFinder output from all 47 species
Ehy_g14344 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.03 OrthoFinder output from all 47 species
GSVIVT01016590001 ABO1, ELO2 RNA biosynthesis.RNA polymerase II-dependent... 0.06 OrthoFinder output from all 47 species
Gb_20472 ABO1, ELO2 component ELP1 of ELONGATOR transcription elongation complex 0.05 OrthoFinder output from all 47 species
LOC_Os07g37640.1 ABO1, ELO2,... component ELP1 of ELONGATOR transcription elongation complex 0.05 OrthoFinder output from all 47 species
Lfl_g09984 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.03 OrthoFinder output from all 47 species
Mp2g09110.1 ABO1, ELO2 component ELP1 of ELONGATOR transcription elongation complex 0.02 OrthoFinder output from all 47 species
Ore_g19682 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.04 OrthoFinder output from all 47 species
Ppi_g43871 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.02 OrthoFinder output from all 47 species
Smo235886 ABO1, ELO2 RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
Solyc05g054630.4.1 ABO1, ELO2,... component ELP1 of ELONGATOR transcription elongation complex 0.07 OrthoFinder output from all 47 species
Zm00001e008063_P001 ABO1, ELO2,... component ELP1 of ELONGATOR transcription elongation complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0002098 tRNA wobble uridine modification IEA Interproscan
CC GO:0033588 elongator holoenzyme complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR006849 Elp1 1 975
No external refs found!