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  5. Ceric.14G000800.1

Ceric.14G000800.1 (SCC2, ATSCC2,...)


Aliases : SCC2, ATSCC2, EMB2773, Ceric.14G000800

Description : adherin *(SCC2) & original description: pacid=50634323 polypeptide=Ceric.14G000800.1.p locus=Ceric.14G000800 ID=Ceric.14G000800.1.v2.1 annot-version=v2.1


Gene families : OG0005074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005074_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.14G000800.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00053630 SCC2, ATSCC2,... Cell cycle.mitosis and meiosis.sister chromatid... 0.08 OrthoFinder output from all 47 species
AT5G15540 SCC2, ATSCC2, EMB2773 PHD finger family protein 0.11 OrthoFinder output from all 47 species
Adi_g086269 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04894 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g16239 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g31097 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15029.t1 SCC2, ATSCC2,... adherin *(SCC2) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007745 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: CDS=544-5985 0.05 OrthoFinder output from all 47 species
Cre06.g278266 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g16382 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g39401 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.14 OrthoFinder output from all 47 species
Dde_g02409 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06224 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01011514001 SCC2, ATSCC2, EMB2773 Cell cycle.mitosis and meiosis.sister chromatid... 0.12 OrthoFinder output from all 47 species
Gb_05661 SCC2, ATSCC2, EMB2773 adherin (SCC2) 0.06 OrthoFinder output from all 47 species
Gb_41687 SCC2, ATSCC2, EMB2773 adherin (SCC2) 0.05 OrthoFinder output from all 47 species
LOC_Os07g01940.1 SCC2, ATSCC2,... adherin (SCC2) 0.1 OrthoFinder output from all 47 species
Len_g24640 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g05042 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.12 OrthoFinder output from all 47 species
MA_10436664g0010 SCC2, ATSCC2, EMB2773 adherin (SCC2) 0.03 OrthoFinder output from all 47 species
MA_10437214g0020 SCC2, ATSCC2, EMB2773 adherin (SCC2) 0.1 OrthoFinder output from all 47 species
MA_97686g0010 SCC2, ATSCC2, EMB2773 adherin (SCC2) 0.02 OrthoFinder output from all 47 species
Mp4g10640.1 SCC2, ATSCC2, EMB2773 adherin (SCC2) 0.07 OrthoFinder output from all 47 species
Msp_g24576 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28623 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g28888 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g08021 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g05355 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g26001 No alias adherin *(SCC2) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g48907 No alias adherin *(SCC2) & original description: none 0.09 OrthoFinder output from all 47 species
Smo440913 SCC2, ATSCC2, EMB2773 Cell cycle.mitosis and meiosis.sister chromatid... 0.08 OrthoFinder output from all 47 species
Spa_g04412 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g05250 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011569_P001 SCC2, ATSCC2,... adherin (SCC2) 0.04 OrthoFinder output from all 47 species
Zm00001e032695_P001 SCC2, ATSCC2,... adherin (SCC2) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 672 719
IPR026003 Cohesin_HEAT 873 914
IPR024986 Nipped-B_C 1369 1564
No external refs found!