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  5. Ceric.12G082000.1

Ceric.12G082000.1 (WAVE4, ITB1, SCAR2,...)


Aliases : WAVE4, ITB1, SCAR2, ATSCAR2, DIS3, Ceric.12G082000

Description : component *(SCAR) of SCAR/WAVE ARP2/3-activating complex & original description: pacid=50601800 polypeptide=Ceric.12G082000.1.p locus=Ceric.12G082000 ID=Ceric.12G082000.1.v2.1 annot-version=v2.1


Gene families : OG0001552 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001552_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.12G082000.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AT2G38440 WAVE4, ITB1,... SCAR homolog 2 0.04 OrthoFinder output from all 47 species
Adi_g128173 ATSCAR4, WAVE3, SCAR4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07765 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.03 OrthoFinder output from all 47 species
Dde_g51913 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.03 OrthoFinder output from all 47 species
Ehy_g06189 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.05 OrthoFinder output from all 47 species
LOC_Os01g11040.1 WAVE4, ITB1,... component SCAR of SCAR/WAVE ARP2/3-activating complex 0.05 OrthoFinder output from all 47 species
Lfl_g37820 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.03 OrthoFinder output from all 47 species
Mp5g21730.1 WAVE4, ITB1,... component SCAR of SCAR/WAVE ARP2/3-activating complex 0.03 OrthoFinder output from all 47 species
Nbi_g04459 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.03 OrthoFinder output from all 47 species
Pir_g18320 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017408 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.04 OrthoFinder output from all 47 species
Solyc02g076840.3.1 WAVE1,... component SCAR of SCAR/WAVE ARP2/3-activating complex 0.03 OrthoFinder output from all 47 species
Spa_g51146 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
BP GO:0110154 RNA decapping IEP HCCA
BP GO:0110156 methylguanosine-cap decapping IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!