Ceric.10G053300.1 (Ceric.10G053300)

Aliases : Ceric.10G053300

Description : not classified & original description: pacid=50613105 polypeptide=Ceric.10G053300.1.p locus=Ceric.10G053300 ID=Ceric.10G053300.1.v2.1 annot-version=v2.1

Gene families : OG0002898 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002898_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.10G053300.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g059339	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g31837	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g04647	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g29055	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g08195	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g27441	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g03321	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g04885	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g11069	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g05206	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ppi_g57164	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021977	No alias	not classified & original description: CDS=1-1806	0.04	OrthoFinder output from all 47 species
Sam_g04621	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g10172	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g15681	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g54337	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	IEP	HCCA
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005759	mitochondrial matrix	IEP	HCCA
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006400	tRNA modification	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
BP	GO:0030488	tRNA methylation	IEP	HCCA
MF	GO:0031267	small GTPase binding	IEP	HCCA
CC	GO:0031515	tRNA (m1A) methyltransferase complex	IEP	HCCA
CC	GO:0031974	membrane-enclosed lumen	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
CC	GO:0034708	methyltransferase complex	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
CC	GO:0043233	organelle lumen	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
CC	GO:0043527	tRNA methyltransferase complex	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0051020	GTPase binding	IEP	HCCA
CC	GO:0070013	intracellular organelle lumen	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007592	GEBP	325	425

External Links

No external refs found!

Ceric.10G053300.1 (Ceric.10G053300)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation