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  5. Ceric.10G013700.1

Ceric.10G013700.1 (Ceric.10G013700)


Aliases : Ceric.10G013700

Description : component *(LHCq) of LHC-II complex & original description: pacid=50613494 polypeptide=Ceric.10G013700.1.p locus=Ceric.10G013700 ID=Ceric.10G013700.1.v2.1 annot-version=v2.1


Gene families : OG0006405 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006405_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.10G013700.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00112770 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder output from all 47 species
AT1G76570 No alias Chlorophyll A-B binding family protein 0.07 OrthoFinder output from all 47 species
Adi_g044529 No alias component *(LHCq) of LHC-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g00780 No alias component *(LHCq) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20424 No alias component *(LHCq) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene39605.t1 Aspi01Gene39605 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23433 No alias component *(LHCq) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14212 No alias component *(LHCq) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01013450001 No alias Photosynthesis.photophosphorylation.photosystem... 0.08 OrthoFinder output from all 47 species
LOC_Os09g12540.1 LOC_Os09g12540 component LHCq of LHC-II complex 0.09 OrthoFinder output from all 47 species
Mp8g12010.1 No alias component LHCq of LHC-II complex 0.03 OrthoFinder output from all 47 species
Ore_g02997 No alias component *(LHCq) of LHC-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g00398 No alias component *(LHCq) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g08686 No alias component *(LHCq) of LHC-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g02034 No alias component *(LHCq) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Smo104804 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Spa_g05023 No alias component *(LHCq) of LHC-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e033739_P001 Zm00001e033739 component LHCq of LHC-II complex 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 129 304
No external refs found!