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  5. Ceric.09G005900.1

Ceric.09G005900.1 (Ceric.09G005900)


Aliases : Ceric.09G005900

Description : not classified & original description: pacid=50588145 polypeptide=Ceric.09G005900.1.p locus=Ceric.09G005900 ID=Ceric.09G005900.1.v2.1 annot-version=v2.1


Gene families : OG0002025 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.09G005900.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00106490 evm_27.TU.AmTr_v1... Uncharacterized protein At1g03900 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aop_g00352 NAP4, ATNAP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028358001 NAP4, ATNAP4 Uncharacterized protein At1g03900 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Len_g38059 NAP4, ATNAP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g053310.3.1 Solyc07g053310 Uncharacterized protein At1g03900 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006897 endocytosis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0000814 ESCRT II complex IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR012466 NECAP_PHear 14 173
No external refs found!