Ceric.08G066100.1 (RSH1, ATRSH1,...)

Aliases : RSH1, ATRSH1, AT-RSH1, Ceric.08G066100

Description : ppGpp hydrolase *(RSH1) & original description: pacid=50638548 polypeptide=Ceric.08G066100.1.p locus=Ceric.08G066100 ID=Ceric.08G066100.1.v2.1 annot-version=v2.1

Gene families : OG0007704 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007704_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.08G066100.1
Cluster	HCCA: Cluster_60

Target	Alias	Description	ECC score	Gene Family Method
AT4G02260	RSH1, ATRSH1, AT-RSH1	RELA/SPOT homolog 1	0.09	OrthoFinder output from all 47 species
Adi_g000749	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g45058	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g01958	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.06	OrthoFinder output from all 47 species
Aop_g13069	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.07	OrthoFinder output from all 47 species
Cba_g03393	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.06	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020961.58	RSH1, ATRSH1, AT-RSH1	Putative GTP diphosphokinase RSH1, chloroplastic...	0.03	OrthoFinder output from all 47 species
Dac_g23400	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g02008	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.07	OrthoFinder output from all 47 species
Dde_g48904	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.06	OrthoFinder output from all 47 species
GSVIVT01028045001	RSH1, ATRSH1, AT-RSH1	Putative GTP diphosphokinase RSH1, chloroplastic...	0.04	OrthoFinder output from all 47 species
LOC_Os03g22160.1	RSH1, ATRSH1,...	Putative GTP diphosphokinase RSH1, chloroplastic...	0.07	OrthoFinder output from all 47 species
Len_g17577	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.06	OrthoFinder output from all 47 species
Lfl_g03474	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.09	OrthoFinder output from all 47 species
Mp6g07090.1	RSH1, ATRSH1, AT-RSH1	Putative GTP diphosphokinase RSH1, chloroplastic...	0.07	OrthoFinder output from all 47 species
Msp_g15202	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g01441	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g41028	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g12213	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.05	OrthoFinder output from all 47 species
Pnu_g13481	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g03956	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g19490	No alias	ppGpp hydrolase *(RSH1) & original description: none	0.11	OrthoFinder output from all 47 species
Solyc09g075390.4.1	RSH1, ATRSH1,...	Putative GTP diphosphokinase RSH1, chloroplastic...	0.06	OrthoFinder output from all 47 species
Solyc09g098580.3.1	RSH1, ATRSH1,...	Putative GTP diphosphokinase RSH1, chloroplastic...	0.05	OrthoFinder output from all 47 species
Spa_g12236	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.08	OrthoFinder output from all 47 species
Tin_g28376	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.1	OrthoFinder output from all 47 species
Zm00001e001610_P003	RSH1, ATRSH1,...	Putative GTP diphosphokinase RSH1, chloroplastic...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEA	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0033865	nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003951	NAD+ kinase activity	IEP	HCCA
MF	GO:0004176	ATP-dependent peptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005244	voltage-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0005247	voltage-gated chloride channel activity	IEP	HCCA
MF	GO:0005253	monoatomic anion channel activity	IEP	HCCA
MF	GO:0005254	chloride channel activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006536	glutamate metabolic process	IEP	HCCA
BP	GO:0006537	glutamate biosynthetic process	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006741	NADP biosynthetic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0006820	monoatomic anion transport	IEP	HCCA
BP	GO:0006821	chloride transport	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008308	voltage-gated monoatomic anion channel activity	IEP	HCCA
MF	GO:0008509	monoatomic anion transmembrane transporter activity	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	HCCA
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	HCCA
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	HCCA
MF	GO:0015108	chloride transmembrane transporter activity	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
MF	GO:0015930	glutamate synthase activity	IEP	HCCA
BP	GO:0016226	iron-sulfur cluster assembly	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	HCCA
MF	GO:0022832	voltage-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	HCCA
BP	GO:0043650	dicarboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004095	TGS	537	596
IPR007685	RelA_SpoT	355	471

External Links

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Ceric.08G066100.1 (RSH1, ATRSH1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation