Ceric.07G008600.1 (UNE6, Ceric.07G008600)

Aliases : UNE6, Ceric.07G008600

Description : pre-mRNA-processing protein *(LUC7) & original description: pacid=50627790 polypeptide=Ceric.07G008600.1.p locus=Ceric.07G008600 ID=Ceric.07G008600.1.v2.1 annot-version=v2.1

Gene families : OG0004423 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004423_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.07G008600.1

Target	Alias	Description	ECC score	Gene Family Method
Aev_g30577	UNE6	pre-mRNA-processing protein *(LUC7) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g10910	UNE6	pre-mRNA-processing protein *(LUC7) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g12075	UNE6	pre-mRNA-processing protein *(LUC7) & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0065.g035861	UNE6	pre-mRNA-processing protein *(LUC7) & original...	0.06	OrthoFinder output from all 47 species
Cba_g14861	UNE6	pre-mRNA-processing protein *(LUC7) & original description: none	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021357.16	No alias	No description available	0.02	OrthoFinder output from all 47 species
Dcu_g32033	UNE6	pre-mRNA-processing protein *(LUC7) & original description: none	0.05	OrthoFinder output from all 47 species
LOC_Os02g39300.1	LOC_Os02g39300	pre-mRNA-processing protein (LUC7)	0.09	OrthoFinder output from all 47 species
Len_g04687	UNE6	pre-mRNA-processing protein *(LUC7) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g13770	UNE6	pre-mRNA-processing protein *(LUC7) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g09785	UNE6	pre-mRNA-processing protein *(LUC7) & original description: none	0.05	OrthoFinder output from all 47 species
Mp7g03530.1	UNE6	pre-mRNA-processing protein (LUC7)	0.03	OrthoFinder output from all 47 species
Smo151152	UNE6	No description available	0.04	OrthoFinder output from all 47 species
Solyc05g056280.2.1	Solyc05g056280	pre-mRNA-processing protein (LUC7)	0.05	OrthoFinder output from all 47 species
Spa_g18908	UNE6	pre-mRNA-processing protein *(LUC7) & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e006322_P004	Zm00001e006322	pre-mRNA-processing protein (LUC7)	0.04	OrthoFinder output from all 47 species
Zm00001e011667_P003	Zm00001e011667	pre-mRNA-processing protein (LUC7)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005685	U1 snRNP	IEA	Interproscan
BP	GO:0006376	mRNA splice site selection	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0022618	ribonucleoprotein complex assembly	None	Extended
CC	GO:0030532	small nuclear ribonucleoprotein complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071826	ribonucleoprotein complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0097525	spliceosomal snRNP complex	None	Extended
CC	GO:0120114	Sm-like protein family complex	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003684	damaged DNA binding	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006289	nucleotide-excision repair	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006334	nucleosome assembly	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006383	transcription by RNA polymerase III	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0010498	proteasomal protein catabolic process	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0030163	protein catabolic process	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0034728	nucleosome organization	IEP	HCCA
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0065004	protein-DNA complex assembly	IEP	HCCA
BP	GO:0071824	protein-DNA complex subunit organization	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004882	Luc7-rel	207	325
IPR004882	Luc7-rel	2	171

External Links

No external refs found!

Ceric.07G008600.1 (UNE6, Ceric.07G008600)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation