Ceric.06G050800.1 (Ceric.06G050800)

Aliases : Ceric.06G050800

Description : component *(FtsHi) of protein translocation ATPase motor complex & original description: pacid=50620515 polypeptide=Ceric.06G050800.1.p locus=Ceric.06G050800 ID=Ceric.06G050800.1.v2.1 annot-version=v2.1

Gene families : OG0007422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007422_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.06G050800.1
Cluster	HCCA: Cluster_149

Target	Alias	Description	ECC score	Gene Family Method
AT4G23940	No alias	FtsH extracellular protease family	0.06	OrthoFinder output from all 47 species
Adi_g021129	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.06	OrthoFinder output from all 47 species
Aev_g01572	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.03	OrthoFinder output from all 47 species
Aop_g13102	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.03	OrthoFinder output from all 47 species
Azfi_s0144.g051562	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.06	OrthoFinder output from all 47 species
Dac_g45732	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.03	OrthoFinder output from all 47 species
GSVIVT01019239001	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.08	OrthoFinder output from all 47 species
Lfl_g02382	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.1	OrthoFinder output from all 47 species
MA_10435856g0010	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.05	OrthoFinder output from all 47 species
Mp6g01370.1	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.1	OrthoFinder output from all 47 species
Nbi_g04434	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.03	OrthoFinder output from all 47 species
Ore_g44793	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006845	No alias	not classified & original description: CDS=1-816	0.03	OrthoFinder output from all 47 species
Sam_g13538	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.04	OrthoFinder output from all 47 species
Solyc08g082530.4.1	Solyc08g082530	Probable inactive ATP-dependent zinc metalloprotease...	0.05	OrthoFinder output from all 47 species
Spa_g05435	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004176	ATP-dependent peptidase activity	IEA	Interproscan
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016881	acid-amino acid ligase activity	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000642	Peptidase_M41	792	871
IPR041569	AAA_lid_3	703	744
IPR003959	ATPase_AAA_core	540	679

External Links

No external refs found!

Ceric.06G050800.1 (Ceric.06G050800)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation