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  5. Ceric.02G004500.1

Ceric.02G004500.1 (Ceric.02G004500)


Aliases : Ceric.02G004500

Description : not classified & original description: pacid=50584632 polypeptide=Ceric.02G004500.1.p locus=Ceric.02G004500 ID=Ceric.02G004500.1.v2.1 annot-version=v2.1


Gene families : OG0007491 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007491_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.02G004500.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g105487 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g117153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03588 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05627 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15883 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11313 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g13790 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene60267.t1 Aspi01Gene60267 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024762 OTP84 not classified & original description: CDS=238-3549 0.04 OrthoFinder output from all 47 species
Azfi_s0099.g043991 OTP84 not classified & original description: CDS=230-3472 0.09 OrthoFinder output from all 47 species
Ceric.15G002000.1 Ceric.15G002000 not classified & original description: pacid=50640344... 0.08 OrthoFinder output from all 47 species
Dac_g14757 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g03497 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21687 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g21256 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22749 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05004 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0234.g026528 No alias not classified & original description: CDS=213-3461 0.04 OrthoFinder output from all 47 species
Sam_g08396 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g09082 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g16249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21963 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 739 786
IPR002885 Pentatricopeptide_repeat 439 463
IPR002885 Pentatricopeptide_repeat 645 670
IPR002885 Pentatricopeptide_repeat 876 900
IPR002885 Pentatricopeptide_repeat 237 263
IPR002885 Pentatricopeptide_repeat 542 570
IPR002885 Pentatricopeptide_repeat 338 366
IPR002885 Pentatricopeptide_repeat 615 637
IPR002885 Pentatricopeptide_repeat 713 737
IPR032867 DYW_dom 1045 1126
No external refs found!