Solyc05g055330.3.1 (Solyc05g055330.3)


Aliases : Solyc05g055330.3

Description : 34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 6 (PDR6)


Gene families : OG_01_0000021 (Gene family) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g055330.3.1
Cluster HCCA cluster: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AT1G15210 ATPDR7, PDR7 pleiotropic drug resistance 7 0.03 Gene family
AT2G26910 PDR4, ATPDR4 pleiotropic drug resistance 4 0.03 Gene family
AT3G53480 PIS1, ABCG37,... pleiotropic drug resistance 9 0.02 Gene family
Cre16.g655450 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
GSVIVT01016993001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01016998001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01031378001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01035715001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os02g21340 Os02g0318450,... 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_10426781g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo429390 PACid_15416241 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc09g091670.3.1 Solyc09g091670.3 34.16 transport.ABC transporters and multidrug... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
MF GO:0016887 ATPase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR029481 ABC_trans_N 110 170
IPR003439 ABC_transporter-like 195 377
IPR013525 ABC_2_trans 1203 1413
IPR013525 ABC_2_trans 531 743
IPR003439 ABC_transporter-like 905 1057
IPR013581 PDR_assoc 748 813
No external refs found!