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  5. Aev_g35444

Aev_g35444


Description : not classified & original description: none


Gene families : OG0000641 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000641_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g35444
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
Ala_g27458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0617.g079545 No alias not classified & original description: CDS=26-442 0.02 OrthoFinder output from all 47 species
Ceric.1Z304800.1 Ceric.1Z304800 not classified & original description: pacid=50597098... 0.03 OrthoFinder output from all 47 species
GSVIVT01011364001 No alias No description available 0.02 OrthoFinder output from all 47 species
Lfl_g27338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013653 No alias not classified & original description: CDS=36-1640 0.02 OrthoFinder output from all 47 species
Spa_g51510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR002372 PQQ_repeat 91 336
IPR002372 PQQ_repeat 457 552
No external refs found!