Aspi01Gene52849.t2 (Aspi01Gene52849)

Aliases : Aspi01Gene52849

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene52849.t2
Cluster	HCCA: Cluster_29

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00229970	WRKY48,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AMTR_s00053p00216880	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00078p00123870	WRKY72,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AT1G13960	WRKY4	WRKY DNA-binding protein 4	0.02	OrthoFinder output from all 47 species
AT2G30250	ATWRKY25, WRKY25	WRKY DNA-binding protein 25	0.04	OrthoFinder output from all 47 species
AT2G44745	No alias	WRKY family transcription factor	0.02	OrthoFinder output from all 47 species
AT3G01970	ATWRKY45, WRKY45	WRKY DNA-binding protein 45	0.02	OrthoFinder output from all 47 species
AT5G46350	WRKY8, ATWRKY8	WRKY DNA-binding protein 8	0.02	OrthoFinder output from all 47 species
Als_g19011	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g42426	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g23484	WRKY49, ATWRKY49	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g25447	ATWRKY59, WRKY59	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g63033	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene49407.t1	ATWRKY71,...	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene57082.t1	WRKY43,...	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene64693.t1	WRKY6, ATWRKY6,...	WRKY-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Azfi_s0206.g057856	WRKY6, ATWRKY6	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Cba_g22410	WRKY3	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g42568	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g29056	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g29177	WRKY26	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01010525001	WRKY75, ATWRKY75	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01012682001	WRKY6, ATWRKY6	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
GSVIVT01018300001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01022259001	ATWRKY13, WRKY13	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01024624001	WRKY33, ATWRKY33	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01029688001	WRKY9, ATWRKY9	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01030258001	WRKY33, ATWRKY33	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01033063001	WRKY75, ATWRKY75	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
LOC_Os01g18584.1	AtWRKY47,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os01g40430.1	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g09020.1	ATWRKY50,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os05g45230.1	WRKY43,...	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
LOC_Os07g02060.1	ATWRKY57,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os11g29870.1	WRKY75,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Len_g40222	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g09240	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_426605g0010	No alias	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Nbi_g28115	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g36467	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g16460	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g19872	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g25341	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g30127	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g60782	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g28344	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g52309	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g094270.2.1	WRKY75,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc03g113120.4.1	WRKY72,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc04g051690.4.1	ATWRKY51,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc05g053380.4.1	WRKY48,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc07g056280.3.1	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc08g081630.2.1	WRKY56,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc12g056750.3.1	ATWRKY51,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Spa_g16109	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g16789	WRKY56, ATWRKY56	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e016623_P001	WRKY72,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e024352_P003	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e027301_P001	WRKY54,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e027460_P001	WRKY56,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e029092_P002	ATWRKY24,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e030443_P001	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	119	176

External Links

No external refs found!

Aspi01Gene52849.t2 (Aspi01Gene52849)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation