Aev_g35033 (ABO1, ELO2)

Aliases : ABO1, ELO2

Description : component *(ELP1) of ELONGATOR transcription elongation complex & original description: none

Gene families : OG0006371 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006371_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aev_g35033

Target	Alias	Description	ECC score	Gene Family Method
AT5G13680	ABO1, ELO2	IKI3 family protein	0.03	OrthoFinder output from all 47 species
Adi_g017444	ABO1, ELO2	component *(ELP1) of ELONGATOR transcription elongation...	0.02	OrthoFinder output from all 47 species
Als_g01968	ABO1, ELO2	component *(ELP1) of ELONGATOR transcription elongation...	0.03	OrthoFinder output from all 47 species
Aob_g11767	ABO1, ELO2	component *(ELP1) of ELONGATOR transcription elongation...	0.02	OrthoFinder output from all 47 species
Azfi_s0658.g081281	ABO1, ELO2	component *(ELP1) of ELONGATOR transcription elongation...	0.02	OrthoFinder output from all 47 species
Cba_g12219	ABO1, ELO2	component *(ELP1) of ELONGATOR transcription elongation...	0.02	OrthoFinder output from all 47 species
Ceric.14G027500.1	ABO1, ELO2,...	component *(ELP1) of ELONGATOR transcription elongation...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000219.40	ABO1, ELO2	Elongator complex protein 1 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Dde_g01760	ABO1, ELO2	component *(ELP1) of ELONGATOR transcription elongation...	0.03	OrthoFinder output from all 47 species
Ehy_g14344	ABO1, ELO2	component *(ELP1) of ELONGATOR transcription elongation...	0.04	OrthoFinder output from all 47 species
LOC_Os07g37640.1	ABO1, ELO2,...	component ELP1 of ELONGATOR transcription elongation complex	0.04	OrthoFinder output from all 47 species
Mp2g09110.1	ABO1, ELO2	component ELP1 of ELONGATOR transcription elongation complex	0.02	OrthoFinder output from all 47 species
Nbi_g04458	ABO1, ELO2	component *(ELP1) of ELONGATOR transcription elongation...	0.03	OrthoFinder output from all 47 species
Ore_g19682	ABO1, ELO2	component *(ELP1) of ELONGATOR transcription elongation...	0.02	OrthoFinder output from all 47 species
Smo235886	ABO1, ELO2	RNA biosynthesis.RNA polymerase II-dependent...	0.03	OrthoFinder output from all 47 species
Solyc05g054630.4.1	ABO1, ELO2,...	component ELP1 of ELONGATOR transcription elongation complex	0.02	OrthoFinder output from all 47 species
Spa_g17971	ABO1, ELO2	component *(ELP1) of ELONGATOR transcription elongation...	0.03	OrthoFinder output from all 47 species
Zm00001e008063_P001	ABO1, ELO2,...	component ELP1 of ELONGATOR transcription elongation complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0002097	tRNA wobble base modification	None	Extended
BP	GO:0002098	tRNA wobble uridine modification	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006400	tRNA modification	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0033588	elongator holoenzyme complex	IEA	Interproscan
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032182	ubiquitin-like protein binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043130	ubiquitin binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006849	Elp1	170	1015
IPR006849	Elp1	1	160

External Links

No external refs found!

Aev_g35033 (ABO1, ELO2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation