Aspi01Gene48248.t2 (WRKY6, ATWRKY6,...)

Aliases : WRKY6, ATWRKY6, Aspi01Gene48248

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene48248.t2
Cluster	HCCA: Cluster_94

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00160270	WRKY75,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AMTR_s00045p00128140	WRKY42,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00058p00090300	WRKY4,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AT2G47260	WRKY23, ATWRKY23	WRKY DNA-binding protein 23	0.03	OrthoFinder output from all 47 species
Aop_g05172	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g25447	ATWRKY59, WRKY59	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene15984.t1	ATWRKY71,...	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene49407.t1	ATWRKY71,...	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene54083.t1	WRKY6, ATWRKY6,...	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene64695.t1	WRKY42,...	WRKY-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene64697.t1	WRKY6, ATWRKY6,...	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0052.g031586	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: CDS=1-864	0.03	OrthoFinder output from all 47 species
Azfi_s0314.g064268	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: CDS=1-2127	0.04	OrthoFinder output from all 47 species
Azfi_s0937.g093180	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: CDS=1-1605	0.03	OrthoFinder output from all 47 species
Cba_g45096	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g68595	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.09G081700.1	ATWRKY50,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.25G052100.1	WRKY42,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g29056	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g42615	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g09793	WRKY3	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g21871	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g27429	WRKY72, ATWRKY72	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01029688001	WRKY9, ATWRKY9	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
GSVIVT01037686001	WRKY6, ATWRKY6	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
LOC_Os01g60600.1	WRKY54,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os02g08440.1	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os05g40060.1	WRKY54,...	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
LOC_Os06g44010.1	WRKY18,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os10g18099.1	WRKY62,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Len_g48398	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g50898	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g09240	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_126273g0010	ATWRKY57, WRKY57	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Ore_g11298	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g16460	WRKY3	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g33827	WRKY53, ATWRKY53	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g63386	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Pnu_g18731	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g26988	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g29855	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g63321	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003023	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: CDS=1-1497	0.03	OrthoFinder output from all 47 species
Sam_g05178	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Smo92733	WRKY31, ATWRKY31	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Spa_g22422	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g22580	WRKY48, ATWRKY48	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g37056	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g42764	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e007834_P002	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e019446_P001	WRKY55,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e026828_P002	ATWRKY50,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	353	410

External Links

No external refs found!

Aspi01Gene48248.t2 (WRKY6, ATWRKY6,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation