Aspi01Gene41969.t1 (AtWRKY20, WRKY20,...)

Aliases : AtWRKY20, WRKY20, Aspi01Gene41969

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene41969.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00015p00181570	WRKY6, ATWRKY6,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AMTR_s00077p00103880	WRKY55,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AT2G44745	No alias	WRKY family transcription factor	0.05	OrthoFinder output from all 47 species
AT4G04450	WRKY42, AtWRKY42	WRKY family transcription factor	0.03	OrthoFinder output from all 47 species
AT4G39410	ATWRKY13, WRKY13	WRKY DNA-binding protein 13	0.04	OrthoFinder output from all 47 species
Adi_g039781	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g117327	WRKY4	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g20798	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g60353	WRKY23, ATWRKY23	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene66845.t2	WRKY42,...	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0030.g024252	No alias	WRKY-type transcription factor & original description: CDS=1-981	0.02	OrthoFinder output from all 47 species
Azfi_s0442.g070360	WRKY3	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g28011	ATWRKY30, WRKY30	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g31501	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01012682001	WRKY6, ATWRKY6	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01015952001	ATWRKY40, WRKY40	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01024388001	No alias	No description available	0.05	OrthoFinder output from all 47 species
GSVIVT01024624001	WRKY33, ATWRKY33	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01026969001	ATWRKY24, WRKY24	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01030258001	WRKY33, ATWRKY33	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
LOC_Os01g14440.1	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os02g53100.1	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os06g05380.1	WRKY72,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Lfl_g36039	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_426605g0010	No alias	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Ore_g09070	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g63386	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g33322	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g29855	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g31084	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g08167	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e018502_P001	WRKY49,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e026554_P001	WRKY31,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e029092_P002	ATWRKY24,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Zm00001e032189_P001	WRKY56,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e032453_P001	WRKY42,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	525	546
IPR003657	WRKY_dom	345	401

External Links

No external refs found!

Aspi01Gene41969.t1 (AtWRKY20, WRKY20,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation