1. Home
  2. Species
  3. Alsophila spinulosa
  4. Sequence
  5. Aspi01Gene38323.t2

Aspi01Gene38323.t2 (MEE24, AtWRKY35,...)


Aliases : MEE24, AtWRKY35, WRKY35, Aspi01Gene38323

Description : WRKY-type transcription factor & original description: none


Gene families : OG0000132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene38323.t2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00264880 WRKY74,... RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
Adi_g080831 ATWRKY65, WRKY65 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38323.t1 MEE24, AtWRKY35,... WRKY-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0028.g023846 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0250.g060244 ATWRKY65, WRKY65 WRKY-type transcription factor & original description: CDS=1-1050 0.04 OrthoFinder output from all 47 species
Ceric.10G067600.1 WRKY21, Ceric.10G067600 WRKY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g05957 ATWRKY11, WRKY11 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019419001 WRKY22, AtWRKY22 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
LOC_Os01g43550.1 ATWRKY27,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os04g21950.1 ATWRKY11,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Ppi_g60473 WRKY17, ATWRKY17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002673 ATWRKY11, WRKY11 WRKY-type transcription factor & original description: CDS=1-1512 0.03 OrthoFinder output from all 47 species
Smo73221 WRKY15 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
Solyc06g008610.3.1 WRKY21, Solyc06g008610 transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
Zm00001e008447_P002 ATWRKY11,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e040077_P001 ATWRKY11,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003657 WRKY_dom 370 427
No external refs found!