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  5. Aspi01Gene22943.t1

Aspi01Gene22943.t1 (HSFB4, SCZ, AT-HSFB4,...)


Aliases : HSFB4, SCZ, AT-HSFB4, Aspi01Gene22943

Description : HSF-type transcription factor & original description: none


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene22943.t1

Target Alias Description ECC score Gene Family Method Actions
AT4G17750 ATHSF1, HSF1,... heat shock factor 1 0.03 OrthoFinder output from all 47 species
AT4G18880 HSF A4A, AT-HSFA4A heat shock transcription factor A4A 0.02 OrthoFinder output from all 47 species
Aev_g18842 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08951 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51530 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033257001 AT-HSFB3, HSFB3 RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 OrthoFinder output from all 47 species
LOC_Os03g25120.1 HSFB4, SCZ,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
LOC_Os09g28354.1 HSF4, HSFB1,... transcription factor (HSF) 0.05 OrthoFinder output from all 47 species
MA_110587g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
MA_12808g0010 HSFA1B, ATHSF3,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
MA_9434330g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Ppi_g12599 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021246 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: CDS=1-1665 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0224.g026285 ATHSF1, HSF1,... HSF-type transcription factor & original description: CDS=1-2472 0.03 OrthoFinder output from all 47 species
Solyc02g072060.3.1 HSFA2, ATHSFA2,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Solyc03g006000.3.1 HSF A4A,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Solyc04g016000.3.1 AT-HSFB3, HSFB3,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Spa_g48007 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 82 171
No external refs found!