Aspi01Gene03227.t1 (HSFB4, SCZ, AT-HSFB4,...)


Aliases : HSFB4, SCZ, AT-HSFB4, Aspi01Gene03227

Description : HSF-type transcription factor & original description: none


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene03227.t1

Target Alias Description ECC score Gene Family Method Actions
Adi_g026921 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036860 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03731 HSFA1B, ATHSF3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27811.t1 AT-HSFA6B,... HSF-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene30579.t1 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene46932.t1 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene54342.t1 HSFA1E,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69372.t1 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g18540 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20621 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g22610.1 AT-HSFA7A,... Heat stress transcription factor A-2a OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
MA_5374g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
MA_9434330g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Pir_g14719 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30272 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc12g007070.2.1 AT-HSFC1, HSFC1,... transcription factor (HSF) 0.01 OrthoFinder output from all 47 species
Tin_g07369 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 12 101
No external refs found!