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  5. Aev_g29489

Aev_g29489 (TAF5)


Aliases : TAF5

Description : component *(TAF5) of SAGA transcription co-activator complex & original description: none


Gene families : OG0005768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005768_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g29489

Target Alias Description ECC score Gene Family Method Actions
Ceric.30G020600.1 TAF5, Ceric.30G020600 component *(TAF5) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Cre12.g526950 RID3 RNA biosynthesis.RNA polymerase II-dependent... 0.01 OrthoFinder output from all 47 species
Mp7g14840.1 TAF5 component TAF5 of SAGA transcription co-activator... 0.01 OrthoFinder output from all 47 species
Zm00001e037634_P004 TAF5, Zm00001e037634 component TAF5 of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 383 413
IPR001680 WD40_repeat 454 486
IPR001680 WD40_repeat 574 612
IPR001680 WD40_repeat 533 570
IPR001680 WD40_repeat 492 528
IPR001680 WD40_repeat 616 654
IPR007582 TFIID_NTD2 101 226
No external refs found!