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  5. Dcu_g42203

Dcu_g42203


Description : subgroup ERF-V transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g42203

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00264660 ATERF3, ERF3,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00007p00268280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00092590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00250320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00099p00029210 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00111p00051610 TINY2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
AT1G12610 DDF1 Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G68550 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G80580 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G25820 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G16280 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G23240 ERF1, ATERF1 ethylene response factor 1 0.02 OrthoFinder output from all 47 species
AT3G57600 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.04 OrthoFinder output from all 47 species
AT4G18450 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G11190 SHN3 Integrase-type DNA-binding superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G11590 TINY2 Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G13330 Rap2.6L related to AP2 6l 0.02 OrthoFinder output from all 47 species
AT5G47220 ERF2, ATERF2, ATERF-2 ethylene responsive element binding factor 2 0.03 OrthoFinder output from all 47 species
AT5G51990 CBF4, DREB1D C-repeat-binding factor 4 0.03 OrthoFinder output from all 47 species
AT5G52020 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g09855 ORA47 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.06 OrthoFinder output from all 47 species
Als_g51652 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.1 OrthoFinder output from all 47 species
Aob_g08822 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aob_g40604 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene06522.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene09185.t1 RAP2.2, Aspi01Gene09185 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Aspi01Gene23153.t1 DEAR1, CEJ1,... subgroup ERF-II transcription factor *(ERF19/20) &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene24330.t1 Aspi01Gene24330 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25574.t1 DEAR1, CEJ1,... subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene25575.t1 DEAR1, CEJ1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene28275.t1 Aspi01Gene28275 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene32072.t1 Aspi01Gene32072 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene53917.t1 Aspi01Gene53917 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g008023 No alias subgroup ERF-V transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0022.g015981 CRF3 subgroup ERF-VI transcription factor & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0263.g060857 LEP subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g23893 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ceric.04G057600.1 RAP2.2, Ceric.04G057600 transcription factor component *(HRE/RAP2.12) of... 0.05 OrthoFinder output from all 47 species
Ceric.10G018900.1 ERF2, ATERF2,... subgroup ERF-VI transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g09321 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Dcu_g01084 No alias subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dcu_g42465 No alias subgroup ERF-III transcription factor & original... 0.07 OrthoFinder output from all 47 species
Dcu_g45380 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g27325 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01013929001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01025461001 RAP2.11 External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
GSVIVT01031388001 CBF4, DREB1D RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01035098001 ERF72, EBP, ATEBP, RAP2.3 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
Gb_01211 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_08781 ABI4, SAN5,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_25978 ABI4, SAN5,... Ethylene-responsive transcription factor ABI4... 0.02 OrthoFinder output from all 47 species
Gb_41294 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g58420.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os01g73770.1 CBF4, DREB1D,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g52670.1 ERF110, LOC_Os02g52670 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g55380.1 LOC_Os02g55380 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
LOC_Os04g52090.1 ATERF-9, ERF9,... transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
LOC_Os05g41780.1 ATERF-9, ERF9,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os06g10780.1 LOC_Os06g10780 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os06g47590.1 ATERF3, ERF3,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g12510.1 ERF110, LOC_Os07g12510 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
LOC_Os08g07700.1 LOC_Os08g07700 Ethylene-responsive transcription factor ERF087... 0.02 OrthoFinder output from all 47 species
LOC_Os08g36920.1 RRTF1, LOC_Os08g36920 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os09g20350.1 RAP2.4, LOC_Os09g20350 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os09g28440.1 RRTF1, LOC_Os09g28440 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os09g35010.1 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1B... 0.03 OrthoFinder output from all 47 species
LOC_Os12g39330.1 RAP2.11, LOC_Os12g39330 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
MA_10430231g0010 WIN1, SHN1 transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
MA_10430769g0010 tny transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
MA_17001g0020 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_2040g0010 No alias transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Mp6g08690.1 TINY2 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Msp_g03917 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03932 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g04749 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Msp_g10836 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g14138 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14069 tny subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g02477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07819 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g29062 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g32986 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40725 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g07555 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.05 OrthoFinder output from all 47 species
Pir_g28144 DDF1 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Pir_g37577 HRE2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44088 No alias subgroup ERF-I transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c2_33310V3.1 ERF2, ATERF2,... ethylene responsive element binding factor 2 0.03 OrthoFinder output from all 47 species
Ppi_g07532 CRF3 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12543 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g22071 No alias subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010554 tny not classified & original description: CDS=1-1182 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012792 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022062 No alias subgroup ERF-VI transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0228.g026387 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc01g067540.2.1 PUCHI, Solyc01g067540 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc01g090300.2.1 ATERF13, ERF13,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc02g090800.1.1 RAP2.6, Solyc02g090800 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc03g005510.2.1 Solyc03g005510 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc03g114440.1.1 RAP2.11, Solyc03g114440 transcription factor (ERF). transcription factor (ERN1) 0.06 OrthoFinder output from all 47 species
Solyc03g117230.1.1 Solyc03g117230 Ethylene-responsive transcription factor ERF084... 0.02 OrthoFinder output from all 47 species
Solyc04g072900.1.1 RAP2.4, Solyc04g072900 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc06g068360.3.1 Solyc06g068360 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc08g078170.1.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc11g012980.1.1 Solyc11g012980 Ethylene-responsive transcription factor ERF012... 0.04 OrthoFinder output from all 47 species
Solyc12g042210.2.1 Solyc12g042210 transcription factor (ERF) 0.06 OrthoFinder output from all 47 species
Spa_g06007 CRF3 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001139_P001 DREB26, Zm00001e001139 Ethylene-responsive transcription factor ERF014... 0.05 OrthoFinder output from all 47 species
Zm00001e010195_P001 DREB1A, ATCBF3,... Dehydration-responsive element-binding protein 1A... 0.01 OrthoFinder output from all 47 species
Zm00001e013927_P001 ATERF3, ERF3,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e014008_P002 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.04 OrthoFinder output from all 47 species
Zm00001e014413_P001 Zm00001e014413 transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
Zm00001e015312_P001 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e015314_P001 ERF5, ATERF-5,... transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Zm00001e015326_P001 Zm00001e015326 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e015327_P001 Zm00001e015327 transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
Zm00001e015328_P001 Zm00001e015328 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Zm00001e015968_P001 Zm00001e015968 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e019159_P001 ERF110, Zm00001e019159 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e019567_P001 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e022016_P001 Zm00001e022016 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e023224_P001 Zm00001e023224 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e023804_P001 DREB26, Zm00001e023804 Ethylene-responsive transcription factor ERF013... 0.01 OrthoFinder output from all 47 species
Zm00001e023816_P001 Zm00001e023816 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e024669_P001 ERF110, Zm00001e024669 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e025064_P001 ATERF3, ERF3,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e030585_P001 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
Zm00001e031497_P001 ABI4, SAN5,... Ethylene-responsive transcription factor ABI4 OS=Oryza... 0.01 OrthoFinder output from all 47 species
Zm00001e032032_P001 ATERF12, ERF12,... transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Zm00001e033072_P001 RAP2.11, Zm00001e033072 transcription factor (ERF). transcription factor (ERN1) 0.02 OrthoFinder output from all 47 species
Zm00001e034242_P001 RAP2.12, Zm00001e034242 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Zm00001e034741_P001 RAP2.11, Zm00001e034741 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Zm00001e036201_P001 Zm00001e036201 Ethylene-responsive transcription factor ERF014... 0.02 OrthoFinder output from all 47 species
Zm00001e037404_P001 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.04 OrthoFinder output from all 47 species
Zm00001e041620_P002 ATERF3, ERF3,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
MF GO:0008987 quinolinate synthetase A activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009435 NAD biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019674 NAD metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 6 54
No external refs found!