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  5. Dcu_g39142

Dcu_g39142 (NCED3, SIS7, STO1, ATNCED3)


Aliases : NCED3, SIS7, STO1, ATNCED3

Description : EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase) & original description: none


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g39142
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00194530 NCED3, SIS7,... Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein 0.02 OrthoFinder output from all 47 species
AT1G30100 ATNCED5, NCED5 nine-cis-epoxycarotenoid dioxygenase 5 0.02 OrthoFinder output from all 47 species
AT3G14440 NCED3, SIS7,... nine-cis-epoxycarotenoid dioxygenase 3 0.04 OrthoFinder output from all 47 species
Aev_g05406 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.05 OrthoFinder output from all 47 species
Aob_g21663 ATNCED9, NCED9 EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Ehy_g25744 CCD4, NCED4 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
GSVIVT01029057001 NCED6, ATNCED6 Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein 0.06 OrthoFinder output from all 47 species
GSVIVT01038080001 NCED3, SIS7,... Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.08 OrthoFinder output from all 47 species
LOC_Os07g05940.1 ATNCED9, NCED9,... neoxanthin cleavage protein 0.03 OrthoFinder output from all 47 species
Len_g58979 ATNCED9, NCED9 EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Nbi_g21905 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001124 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Solyc07g056570.1.1 NCED3, SIS7,... neoxanthin cleavage protein 0.03 OrthoFinder output from all 47 species
Zm00001e012402_P001 NCED3, SIS7,... neoxanthin cleavage protein 0.03 OrthoFinder output from all 47 species
Zm00001e017976_P001 NCED3, SIS7,... neoxanthin cleavage protein 0.03 OrthoFinder output from all 47 species
Zm00001e032833_P001 ATNCED9, NCED9,... neoxanthin cleavage protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 1 244
No external refs found!