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  5. Dcu_g38954

Dcu_g38954


Description : not classified & original description: none


Gene families : OG0004055 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g38954

Target Alias Description ECC score Gene Family Method Actions
AT4G16180 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from all 47 species
Aev_g08409 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008739 No alias not classified & original description: CDS=112-2547 0.03 OrthoFinder output from all 47 species
Ceric.38G011500.1 Ceric.38G011500 not classified & original description: pacid=50580297... 0.04 OrthoFinder output from all 47 species
Cre10.g463300 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_29086 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_32615 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g19690.1 LOC_Os03g19690 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g00410.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g09264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17787 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo235127 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g058730.4.1 Solyc01g058730 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc05g051345.1.1 Solyc05g051345 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e001468_P001 Zm00001e001468 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0097354 prenylation IEP HCCA

No InterPro domains available for this sequence

No external refs found!