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  5. Dcu_g37518

Dcu_g37518 (SDG30, ATX2)


Aliases : SDG30, ATX2

Description : not classified & original description: none


Gene families : OG0006147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g37518
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00150780 ATX1, SDG27,... Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g21981 SDG30, ATX2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37430 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g59370 ATX3, SDG14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29506 ATX4, SDG16 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene11062.t1 Aspi01Gene11062 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0215.g058370 SDG30, ATX2 not classified & original description: CDS=559-6048 0.05 OrthoFinder output from all 47 species
Dde_g27002 ATX4, SDG16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01035924001 ATX1, SDG27 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01035925001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_26322 SET29, SDG29, ATX5 Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_10436998g0020 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Mp1g26800.1 SDG30, ATX2 Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g15718 SDG30, ATX2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g25600 ATX4, SDG16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29454 ATX1, SDG27 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo424372 No alias Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Tin_g20520 ATX4, SDG16 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140612 DNA damage sensor activity IEP HCCA
MF GO:0140664 ATP-dependent DNA damage sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 272 319
IPR001214 SET_dom 2113 2220
No external refs found!