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  5. Dcu_g35364

Dcu_g35364 (PBC1)


Aliases : PBC1

Description : beta-type-3 component *(PBC) of 26S proteasome & original description: none


Gene families : OG0004036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g35364
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00168080 PBC1,... Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
AT1G21720 PBC1 proteasome beta subunit C1 0.07 OrthoFinder output from all 47 species
AT1G77440 PBC2 20S proteasome beta subunit C2 0.04 OrthoFinder output from all 47 species
Adi_g018669 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aev_g00417 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Als_g00265 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aob_g01174 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.07 OrthoFinder output from all 47 species
Aop_g00275 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.09 OrthoFinder output from all 47 species
Azfi_s0008.g011490 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Cba_g26177 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Ceric.13G038700.1 PBC1, Ceric.13G038700 beta-type-3 component *(PBC) of 26S proteasome &... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000826.22 PBC1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
Cre06.g267500 PBC1 Protein degradation.26S proteasome.20S core... 0.09 OrthoFinder output from all 47 species
Dde_g03144 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
GSVIVT01008836001 PBC1 Protein degradation.26S proteasome.20S core... 0.12 OrthoFinder output from all 47 species
Gb_09326 PBC1 component beta type-3 of 26S proteasome 0.06 OrthoFinder output from all 47 species
Gb_29749 PBC1 component beta type-3 of 26S proteasome 0.07 OrthoFinder output from all 47 species
LOC_Os02g08520.1 PBC1, LOC_Os02g08520 component beta type-3 of 26S proteasome 0.05 OrthoFinder output from all 47 species
LOC_Os06g43570.1 PBC1, LOC_Os06g43570 component beta type-3 of 26S proteasome 0.07 OrthoFinder output from all 47 species
Len_g24778 PBC2 beta-type-3 component *(PBC) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Lfl_g00669 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
MA_70161g0010 PBC1 component beta type-3 of 26S proteasome 0.07 OrthoFinder output from all 47 species
MA_9526163g0010 PBC1 component beta type-3 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Mp7g15370.1 PBC1 component beta type-3 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Msp_g01419 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Pp3c7_520V3.1 PBC1, Pp3c7_520 proteasome beta subunit C1 0.03 OrthoFinder output from all 47 species
Ppi_g06188 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Sam_g51100 No alias beta-type-3 component *(PBC) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Smo266913 PBC1 Protein degradation.26S proteasome.20S core... 0.04 OrthoFinder output from all 47 species
Solyc04g009410.3.1 PBC1, Solyc04g009410 component beta type-3 of 26S proteasome 0.09 OrthoFinder output from all 47 species
Spa_g56434 PBC1 beta-type-3 component *(PBC) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Zm00001e013846_P001 PBC1, Zm00001e013846 component beta type-3 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Zm00001e030465_P001 PBC1, Zm00001e030465 component beta type-3 of 26S proteasome 0.07 OrthoFinder output from all 47 species
Zm00001e037487_P001 PBC1, Zm00001e037487 component beta type-3 of 26S proteasome 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0051011 microtubule minus-end binding IEP HCCA
CC GO:0061617 MICOS complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 45 226
No external refs found!