Aliases : UBP23
Description : deubiquitinase *(UBP23) & original description: none
Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dcu_g26398 | |
Cluster | HCCA: Cluster_38 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G17110 | UBP15 | ubiquitin-specific protease 15 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0008.g011482 | UBP23 | not classified & original description: CDS=78-2153 | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000711.8 | UBP25 | Protein degradation.peptidase families.cysteine-type... | 0.01 | OrthoFinder output from all 47 species | |
Cre06.g248950 | UBP25 | Ubiquitin carboxyl-terminal hydrolase 18 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g07912 | UBP23 | deubiquitinase *(UBP23) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g46650.1 | UBP21, LOC_Os02g46650 | Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g43480.1 | UBP25, LOC_Os05g43480 | deubiquitinase (UBP25) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os09g28940.1 | UBP17, LOC_Os09g28940 | deubiquitinase (UBP15-21) | 0.02 | OrthoFinder output from all 47 species | |
Len_g45877 | UBP23 | deubiquitinase *(UBP23) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g09709 | UBP18 | deubiquitinase *(UBP15-21) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g10823 | UBP23 | deubiquitinase *(UBP23) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10431488g0010 | UBP23 | deubiquitinase (UBP23) | 0.02 | OrthoFinder output from all 47 species | |
Mp2g05560.1 | UBP18 | deubiquitinase (UBP15-21) | 0.02 | OrthoFinder output from all 47 species | |
Mp3g16110.1 | UBP23 | deubiquitinase (UBP23) | 0.02 | OrthoFinder output from all 47 species | |
Ore_g27850 | UBP23 | deubiquitinase *(UBP23) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0044.g012965 | UBP25 | component *(bL25m) of large mitoribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g04367 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g50169 | No alias | deubiquitinase *(UBP15-21) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo420048 | UBP18 | Protein degradation.peptidase families.cysteine-type... | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g076210.3.1 | UBP16, Solyc04g076210 | deubiquitinase (UBP15-21) | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g005530.4.1 | UBP23, Solyc07g005530 | deubiquitinase (UBP23) | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g056520.3.1 | UBP25, Solyc07g056520 | deubiquitinase (UBP25) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e027381_P003 | UBP25, Zm00001e027381 | deubiquitinase (UBP25) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e032099_P001 | UBP25, Zm00001e032099 | deubiquitinase (UBP25) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEA | Interproscan |
BP | GO:0016579 | protein deubiquitination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005694 | chromosome | IEP | HCCA |
CC | GO:0005886 | plasma membrane | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0009306 | protein secretion | IEP | HCCA |
BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
BP | GO:0023051 | regulation of signaling | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0032940 | secretion by cell | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0035592 | establishment of protein localization to extracellular region | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
BP | GO:0046903 | secretion | IEP | HCCA |
BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
BP | GO:0071692 | protein localization to extracellular region | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
BP | GO:0140352 | export from cell | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001394 | Peptidase_C19_UCH | 89 | 391 |
No external refs found! |