1. Home
  2. Species
  3. Dicranopteris curranii
  4. Sequence
  5. Dcu_g21277

Dcu_g21277 (ATHM4, TRX-M4, ATM4)


Aliases : ATHM4, TRX-M4, ATM4

Description : thioredoxin *(TRX-M) & original description: none


Gene families : OG0001012 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001012_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g21277
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00016000 ATHM2,... Redox homeostasis.chloroplast redox homeostasis.M-type... 0.1 OrthoFinder output from all 47 species
AT1G03680 ATHM1, THM1, TRX-M1, ATM1 thioredoxin M-type 1 0.12 OrthoFinder output from all 47 species
AT3G15360 ATHM4, TRX-M4, ATM4 thioredoxin M-type 4 0.12 OrthoFinder output from all 47 species
Adi_g086491 ATHM4, TRX-M4, ATM4 thioredoxin *(TRX-M) & original description: none 0.12 OrthoFinder output from all 47 species
Adi_g107265 ATHM4, TRX-M4, ATM4 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Aev_g32022 ATHM4, TRX-M4, ATM4 thioredoxin *(TRX-M) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09870 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g23908 ATHM4, TRX-M4, ATM4 thioredoxin *(TRX-M) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12040 ATHM2 thioredoxin *(TRX-M) & original description: none 0.12 OrthoFinder output from all 47 species
Als_g21943 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.14 OrthoFinder output from all 47 species
Als_g48830 ATHM2 thioredoxin *(TRX-M) & original description: none 0.07 OrthoFinder output from all 47 species
Als_g58971 ATHM2 thioredoxin *(TRX-M) & original description: none 0.1 OrthoFinder output from all 47 species
Aob_g04875 ATHM2 thioredoxin *(TRX-M) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08794 ATHM2 thioredoxin *(TRX-M) & original description: none 0.11 OrthoFinder output from all 47 species
Aob_g24176 ATHM4, TRX-M4, ATM4 thioredoxin *(TRX-M) & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g39548 ATHM2 thioredoxin *(TRX-M) & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g11048 ATHM2 thioredoxin *(TRX-M) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0110.g045543 ATHM4, TRX-M4, ATM4 thioredoxin *(TRX-M) & original description: CDS=236-865 0.07 OrthoFinder output from all 47 species
Azfi_s0144.g051537 ATHM4, TRX-M4, ATM4 thioredoxin *(TRX-M) & original description: CDS=12-806 0.05 OrthoFinder output from all 47 species
Cba_g19197 ATHM2 thioredoxin *(TRX-M) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g23725 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.1 OrthoFinder output from all 47 species
Ceric.09G062900.1 ATHM2, Ceric.09G062900 thioredoxin *(TRX-M) & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.16G010700.1 ATHM4, TRX-M4,... thioredoxin *(TRX-M) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.17G060800.1 ATHM2, Ceric.17G060800 thioredoxin *(TRX-M) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.23G041700.1 ATHM2, Ceric.23G041700 thioredoxin *(TRX-M) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.30G036000.1 ATHM1, THM1,... thioredoxin *(TRX-M) & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001477.10 ATHM4, TRX-M4, ATM4 Redox homeostasis.chloroplast redox homeostasis.X-type... 0.02 OrthoFinder output from all 47 species
Dac_g01349 ATHM2 thioredoxin *(TRX-M) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g02608 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.11 OrthoFinder output from all 47 species
Dde_g23261 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03185 ATHM2 thioredoxin *(TRX-M) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08153 ATHM2 thioredoxin *(TRX-M) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g09639 ATHM2 thioredoxin *(TRX-M) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010012001 ATHM4, TRX-M4, ATM4 Redox homeostasis.chloroplast redox homeostasis.M-type... 0.05 OrthoFinder output from all 47 species
GSVIVT01014360001 ATHM4, TRX-M4, ATM4 Redox homeostasis.chloroplast redox homeostasis.M-type... 0.11 OrthoFinder output from all 47 species
Gb_00914 ATHM2 M-type thioredoxin 0.05 OrthoFinder output from all 47 species
Gb_31181 ATHM2 M-type thioredoxin 0.03 OrthoFinder output from all 47 species
LOC_Os12g08730.1 ATHM2, LOC_Os12g08730 M-type thioredoxin 0.08 OrthoFinder output from all 47 species
Len_g07374 ATHM2 thioredoxin *(TRX-M) & original description: none 0.08 OrthoFinder output from all 47 species
Len_g09823 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.12 OrthoFinder output from all 47 species
Len_g16078 ATHM4, TRX-M4, ATM4 thioredoxin *(TRX-M) & original description: none 0.1 OrthoFinder output from all 47 species
Lfl_g19591 ATHM2 thioredoxin *(TRX-M) & original description: none 0.02 OrthoFinder output from all 47 species
MA_474303g0010 ATHM2 M-type thioredoxin 0.04 OrthoFinder output from all 47 species
Mp4g18950.1 ATHM1, THM1, TRX-M1, ATM1 M-type thioredoxin 0.12 OrthoFinder output from all 47 species
Msp_g01870 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12620 ATHM2 thioredoxin *(TRX-M) & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g10092 ATHM2 thioredoxin *(TRX-M) & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g01815 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g10112 ATHM2 thioredoxin *(TRX-M) & original description: none 0.1 OrthoFinder output from all 47 species
Pnu_g10809 ATHM2 thioredoxin *(TRX-M) & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c25_2880V3.1 ATHM1, THM1,... thioredoxin M-type 1 0.03 OrthoFinder output from all 47 species
Ppi_g02691 ATHM2 thioredoxin *(TRX-M) & original description: none 0.11 OrthoFinder output from all 47 species
Ppi_g20812 ATHM4, TRX-M4, ATM4 thioredoxin *(TRX-M) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22064 ATHM4, TRX-M4, ATM4 thioredoxin *(TRX-M) & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010739 ATHM2 thioredoxin *(TRX-M) & original description: CDS=187-714 0.02 OrthoFinder output from all 47 species
Sam_g07636 No alias thioredoxin *(TRX-M) & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g07637 No alias thioredoxin *(TRX-M) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g24018 No alias thioredoxin *(TRX-M) & original description: none 0.08 OrthoFinder output from all 47 species
Smo230724 ATHM2 Redox homeostasis.chloroplast redox homeostasis.M-type... 0.02 OrthoFinder output from all 47 species
Solyc07g063190.3.1 ATHM4, TRX-M4,... M-type thioredoxin 0.05 OrthoFinder output from all 47 species
Solyc10g006970.3.1 ATHM4, TRX-M4,... M-type thioredoxin 0.09 OrthoFinder output from all 47 species
Solyc12g013810.2.1 ATHM4, TRX-M4,... M-type thioredoxin 0.12 OrthoFinder output from all 47 species
Spa_g06831 ATHM2 thioredoxin *(TRX-M) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06832 ATHM2 thioredoxin *(TRX-M) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g06833 ATHM2 thioredoxin *(TRX-M) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14111 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g19071 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52025 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g00552 ATHM1, THM1, TRX-M1, ATM1 thioredoxin *(TRX-M) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018385_P001 ATHM4, TRX-M4,... M-type thioredoxin 0.06 OrthoFinder output from all 47 species
Zm00001e039586_P001 ATHM2, Zm00001e039586 M-type thioredoxin 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 117 215
No external refs found!