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  5. Dcu_g20092

Dcu_g20092


Description : not classified & original description: none


Gene families : OG0000954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g20092

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00208300 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G27860 No alias Tudor/PWWP/MBT superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g017529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21623 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30897 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g17586 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g13826 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g14356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.29G059500.1 Ceric.29G059500 N-methyltransferase component *(ATX3/4/5) of COMPASS... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000808.1 CHR01, CHR1,... No description available 0.01 OrthoFinder output from all 47 species
Dac_g32171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016344001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01031118001 No alias No description available 0.07 OrthoFinder output from all 47 species
GSVIVT01032455001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_40891 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g38810.1 LOC_Os05g38810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g19810.1 LOC_Os11g19810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g20479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03857 No alias N-methyltransferase component *(ATX3/4/5) of COMPASS... 0.04 OrthoFinder output from all 47 species
Ore_g16152 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43036 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g06451 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06983 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g25442 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g46989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020704 No alias not classified & original description: CDS=1-3852 0.05 OrthoFinder output from all 47 species
Sam_g14247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22353 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g099360.3.1 Solyc01g099360 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g15700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g31146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13993 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e031849_P002 Zm00001e031849 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 373 456
No external refs found!