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  5. Dcu_g17466

Dcu_g17466


Description : chromatin architectural modulator *(DEK) & original description: none


Gene families : OG0001438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g17466
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AT3G48710 No alias DEK domain-containing chromatin associated protein 0.03 OrthoFinder output from all 47 species
AT4G26630 No alias DEK domain-containing chromatin associated protein 0.05 OrthoFinder output from all 47 species
AT5G55660 No alias DEK domain-containing chromatin associated protein 0.03 OrthoFinder output from all 47 species
Adi_g021163 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g023551 No alias chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species
Adi_g029375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g114044 No alias chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species
Aop_g07111 No alias chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species
Aop_g11700 No alias chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species
Cba_g59270 No alias chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g06745 No alias chromatin architectural modulator *(DEK) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01014672001 No alias No description available 0.03 OrthoFinder output from all 47 species
MA_108165g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g05240 No alias chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species
Ore_g08356 No alias chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000356 No alias chromatin architectural modulator *(DEK) & original... 0.02 OrthoFinder output from all 47 species
Sam_g16952 No alias chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species
Solyc03g097490.4.1 Solyc03g097490 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g065490.3.1 Solyc07g065490 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g05087 No alias chromaTin architectural modulator *(DEK) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e004959_P001 Zm00001e004959 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e012462_P001 Zm00001e012462 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR014876 DEK_C 573 626
No external refs found!